| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1686 |
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| Symbol | |
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| ID | 4252262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1999986 |
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| End bp | 2001221 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118299 |
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| Product | phage integrase family protein |
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| Protein accession | YP_733819 |
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| Protein GI | 113970026 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.034435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0441759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGA GTACAAATAA GCTGACTGCA AAAGCGGTGC TCAATGCTAA AGCGGAAGCA
AAGCCCTATA GATTGTCAGA TGGTGGCAAT CTCTATCTCT ATGTGCGTAC TGCAGGGAAA
ACTTGGGAAT TTAGATACAT ACGTCCCTCC ACCAGCAAAC CCACCTATTT TGGTTTAGGC
TCATATCCTG ACGTATCCTT AGCTGAGGCG CGAGATAAAG CGCTAGAAGC GCGAAAAAAC
TTGGCCGAAG GCATCGACCC TCAATTACTT AAAGTTGAAA ACAAATTAAA AGCGGCAACA
GAGAACGCTC AAACTCTCAA GCATATTGCG CAAATGTGGA TGGACTCTAA GCAGGGAAGC
ATTAAGCCTA AAACCATCGA AGGCAATTGG CGTAAGCTTG AGCTGTATGC CTTCCCTAAA
CTGGGGAGTA TTGCGATTAG CAGACTCACG GCTCCCATAG CCATTGCCGC GCTAAAGCCC
CTAGAGCAGA AGGGGCATCT TGAAACGGTT AAGCGTACCG CTCAGTTGCT GAATGAAATC
ATGAACTTTT CAGTTAACTC TGGTTACATT CATGCTAATC CGTTGTCAGG TATTCGAGAA
GTTTTTAGAA AGAGCAAAGT AGAACATCTG AAAGCATTAA AACCAGCAGA GCTAGCTGAG
TTGCTGCAGA CTATTGCAAA CGCCAATTTA TTGTTAACGA CCCGGTGTTT GATTGAATGG
CAATTGCACA CAATGACCAG GCCAAATGAA GCGGCCGGAG CCCGTTGGGA AGAAATCGAT
TTTGATGCCA AACTTTGGAC TATTCCTGAA TCACGCATGA AAATGAATCG TGAGCATATT
ATCCCGCTTA CAGAGCATAC CCTCGCGATA CTCGAAACTG TTAAGCCGAT TAGTGAACAG
AGCCAATTTG TCTTTCCATC ATCTAAAGAT CCTCAAAAGC ACACAGATCC TGAAACCATT
AACAAAGCAT TAGGGCGCAT GGGATTAAAG GGAAGAACAA CGGGTCATGG TTTACGCTCG
CTTGCGAGCA CTACCTTAAA CGAGCAAGGC TTTGATGGTG ATGTTATTGA GGCAGCGTTA
GCCCATGTTG ATAAAAACCA AATCCGCAGT GCCTATAATC GCACGACCTA CCTAGAGCGA
CGGACCAAGT TAATGGAGTG GTGGAGCAAC CATATTGCCA CTGCAGCAGT GGGCTCTTTG
TCAGTAACAG CTAGTTCAAG AAAATTAGGG GCATGA
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| Protein sequence | MGRSTNKLTA KAVLNAKAEA KPYRLSDGGN LYLYVRTAGK TWEFRYIRPS TSKPTYFGLG
SYPDVSLAEA RDKALEARKN LAEGIDPQLL KVENKLKAAT ENAQTLKHIA QMWMDSKQGS
IKPKTIEGNW RKLELYAFPK LGSIAISRLT APIAIAALKP LEQKGHLETV KRTAQLLNEI
MNFSVNSGYI HANPLSGIRE VFRKSKVEHL KALKPAELAE LLQTIANANL LLTTRCLIEW
QLHTMTRPNE AAGARWEEID FDAKLWTIPE SRMKMNREHI IPLTEHTLAI LETVKPISEQ
SQFVFPSSKD PQKHTDPETI NKALGRMGLK GRTTGHGLRS LASTTLNEQG FDGDVIEAAL
AHVDKNQIRS AYNRTTYLER RTKLMEWWSN HIATAAVGSL SVTASSRKLG A
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