| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1674 |
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| Symbol | pepN |
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| ID | 4252250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1975861 |
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| End bp | 1978410 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118286 |
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| Product | aminopeptidase N |
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| Protein accession | YP_733807 |
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| Protein GI | 113970014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0300975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.663884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAG CACAAGCAAA ATATCTTAAA GATTATCAAG CTCCCCAGTT CACGATCGAA
ACCATTGATT TAGATTTTAA TCTCGATGGT AAAAACACCC TGGTTAAAGC CGTTAGCAAA
GTCAAACGCA CTTCATCTCA CACCAATCCC TTAGTGCTAG ATGGTGAAAG TTTGACCTTA
GTGAGTGTGG CCATTGATGG ACAAGCGGCG ACGTATCACG CGAGTGAAGG GCTGTTGTCC
ATCGAGACAT CGCTGAATGA ATTTGAGTTG ACCATCATCA CCCAACTCGA TCCCGAGGCT
AACTCAAGCC TCGAAGGGCT ATATATGTCC GACGGCGCCT ACTGTACTCA GTGCGAAGCC
GAAGGCTTTA GACGCATCAC TTATTTTCTC GACCGCCCCG ATGTGTTAGC CAAATACACA
GTGCGAATCG AAGCCGATAA GCTGGCGTTT CCGTTCCTGC TTAGCAACGG TAACTTGATT
GAGAAAGGCG AGCTCGATGG TGGCCGCCAT TACGTGCGCT GGCAGGATCC CTTCCCAAAA
CCCGCCTATC TGTTTGCTTT AGTCGCTGGC GATTTCGATC TGCTACAGGA TGAGTTTATC
ACCCGCAGTC ATCGCAAAGT GGTACTGCAG GTGTTTGTCG ATAAAGGTAA TTTACACAAA
GCACACCATG CGATGGCGTC CCTGAAAAAG TCTATGGCCT GGGATGAATC TCGTTTTGAC
CTAGAATACG ACTTAGATAT CTACATGATA GTCGCGGTCG ACTTCTTCAA TATGGGGGCG
ATGGAAAACA AAGGCTTAAA TATCTTCAAC ACCAAGTATG TGTTGGCAGA TACCTTGACC
GCAACCGACG AGGATTACCA CGGCATTGAA TCTGTGGTCG GCCATGAGTA CTTCCATAAC
TGGACGGGTA ACCGCGTGAC TTGCCGTGAC TGGTTCCAAT TAAGCCTCAA GGAAGGCTTG
ACAGTGTTTC GCGATCAAGA GTTTAGTTCG GATTTAGGTT CGCGTGCTGT GAACCGAATT
CACGCGATTA AAGTCATCAA AAACCAGCAG TTTGCTGAAG ACTCAGGCCC AATGGCGCAT
CCGATCCGCC CCGAGTCTGT GATTGAGATG AATAATTTTT ATACTGTTAC TGTGTATAAC
AAGGGCGCTG AAGTTATTCG CATGATGCAC ACCCTGTTGG GTGAAGCCCA TTTCCAAGCG
GGGATGAAGT TATACTTCAA ACGTCACGAT GGCCAAGCCG TGACTTGCGA TGATTTTGTC
GCGGCGATGG AAGATGCCAG TGGAATCGAT TTAACGCAAT TCCGTCTCTG GTATAGCCAA
GCGGGCACGC CAATTGTCAC CGCAAGCGAC AGTTTTAATG CTGACACAGG GACTTATCAG
TTAACCCTCA AACAAACGTT AGCTGGTTGT GCTTCACCCT TGCATATCCC CTTTAGCTTA
GAGCTGTTAG ATGAGAAAGG GCAGTCACTG GTAAATCAAG TGCTTGATTT TACTCAAGCA
GAGCAAGTTT TTACATTTGA AGGCATGCGC CATAAACCCG TGGCATCCTT ACTACAGGAT
TTCTCTGCAC CGGTTAAATT ACATTATCCC TTTGAAATCG ATCAGCTTGT GCATTTGATG
CGCTTTGCCT CGAGTGAAGT GGCGCGTTGG GAGGCGTCGG TTACGCTCGT GAGCCAAGCG
ATTTGGCAAA ATGTGGCGCA TTTACAGCAA CATCACACCA TGACCTTAGA TGAGAGAGTG
AAGGACAGCT TTAAAGGCGC CTTACTCGAT GAGCAGTTAG ATCAGGCGCT GATGGCGGAA
ATGTTAGCCA TACCATCGGC CTCAGCGTTG ATTGAACAAA CCGACACGGT CGATTTAGAT
GCCTTAGCTT TAGCCCGTGA ATTTGTGCTC ACAGAGCTTG CCGCCTATTG TGAAGATGAA
TTAACGGCGC TGTATCGCTC ATTGGTAAAC CGTGATTGCA CAAAAGCGCG AGCGCTGAAA
AACCAATGTC TTAACTGGTT GAGCCGAGTC AGTAGCGAGG CCGAAAGCTT TGTGGTTGAG
CAGTTTGAGA AGGCTGCCAA TATGACCGAC TCACTCGGCG CATTAAGTGC GGCGAATGTC
GGTTCGCTAC CTTGCCGCGA ACATTTGATG GCAATGTTTG AAGCCCGCTG GCGCGATACG
CCGCTGGTGA TGGACAAATG GTTCATGCTG CAGGCTACCC ATGATGTGGA AGGGGTGATT
GATAGCTTGC GTCAATTACA ACAACACGCG AGCTTTAGCA TGAGCAATCC TAACCGCGTA
CGTTCACTGA TTGGCAGTTT CGCAGCGGGG AATATTTATC AATTCCACCG CGCCGATGGC
AAAGGTTATG AGTTTTTAAC TGAATGTCTT ATCAGCTTAA ATAAACTCAA CCCGCAGGTT
GCGGCGCGTA TGGTGACGCC ACTCATCCAA TTTAGTAAGT TTGATGAGGC GCGCCAAGCC
AAGATCAAGG CTTGTTTAAC GCGATTGTTG GCACTGCCTG AACTGTCGAA AGATTTATTC
GAGAAAGTAT CTAAGGCATT AGCACAGTAG
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| Protein sequence | MTQAQAKYLK DYQAPQFTIE TIDLDFNLDG KNTLVKAVSK VKRTSSHTNP LVLDGESLTL
VSVAIDGQAA TYHASEGLLS IETSLNEFEL TIITQLDPEA NSSLEGLYMS DGAYCTQCEA
EGFRRITYFL DRPDVLAKYT VRIEADKLAF PFLLSNGNLI EKGELDGGRH YVRWQDPFPK
PAYLFALVAG DFDLLQDEFI TRSHRKVVLQ VFVDKGNLHK AHHAMASLKK SMAWDESRFD
LEYDLDIYMI VAVDFFNMGA MENKGLNIFN TKYVLADTLT ATDEDYHGIE SVVGHEYFHN
WTGNRVTCRD WFQLSLKEGL TVFRDQEFSS DLGSRAVNRI HAIKVIKNQQ FAEDSGPMAH
PIRPESVIEM NNFYTVTVYN KGAEVIRMMH TLLGEAHFQA GMKLYFKRHD GQAVTCDDFV
AAMEDASGID LTQFRLWYSQ AGTPIVTASD SFNADTGTYQ LTLKQTLAGC ASPLHIPFSL
ELLDEKGQSL VNQVLDFTQA EQVFTFEGMR HKPVASLLQD FSAPVKLHYP FEIDQLVHLM
RFASSEVARW EASVTLVSQA IWQNVAHLQQ HHTMTLDERV KDSFKGALLD EQLDQALMAE
MLAIPSASAL IEQTDTVDLD ALALAREFVL TELAAYCEDE LTALYRSLVN RDCTKARALK
NQCLNWLSRV SSEAESFVVE QFEKAANMTD SLGALSAANV GSLPCREHLM AMFEARWRDT
PLVMDKWFML QATHDVEGVI DSLRQLQQHA SFSMSNPNRV RSLIGSFAAG NIYQFHRADG
KGYEFLTECL ISLNKLNPQV AARMVTPLIQ FSKFDEARQA KIKACLTRLL ALPELSKDLF
EKVSKALAQ
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