Gene Shewmr4_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1657 
Symbol 
ID4252233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1958479 
End bp1959117 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID638118269 
Producturidine kinase 
Protein accessionYP_733790 
Protein GI113969997 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0722731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC AGCAGTGTGT CATTATTGCA ATTGCTGGCG CGTCAGCATC GGGCAAGAGT 
TTAATTGCCA AGACGATTTT TGACGAACTT CGCCGCGATT TAGGCACAGA TCAGATTGGG
GTAATTAACG AAGACGCGTA CTATCGCGAT CAGAGTCATT TATCCATGGA TGAGCGTGTA
TTAACAAACT ACGACCATCC CAAAGCGTTA GACCATCAGC TGCTATGTAC GCACTTGCAG
TTGCTAAAGT CTGGCGAAGC TGTTGATATT CCTTGCTATA GCTATACCGA ACATACGCGT
ATGGCCGAAA CCGTAAAAAT GACGCCGAAA AAAGTGATCA TTTTAGAAGG CATCCTGCTG
TTAACAGACC CTAAATTACG TGAATTGATG GATGCGAGCG TGTTTATGGA TACGCCGCTG
GACATTTGCT TCCTGCGCCG TTTAACCCGC GACGTGGCCG AGCGTGGCCG TACAATGGAA
TCGGTGATTT CACAGTACAA GAAGACAGTG CGCCCTATGT TCCTGCAATT TATTGAACCT
TCAAAACAAT ACGCTGATAT TATCGTGCCT CGTGGTGGTA AAAACCGTAT CGCGACCGAT
ATTTTGAAGA CTCGTATTCA ACATCTACTG GCAAAATAA
 
Protein sequence
MNSQQCVIIA IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYRD QSHLSMDERV 
LTNYDHPKAL DHQLLCTHLQ LLKSGEAVDI PCYSYTEHTR MAETVKMTPK KVIILEGILL
LTDPKLRELM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKKTV RPMFLQFIEP
SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK