Gene Shewmr4_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1650 
Symbol 
ID4252226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1951160 
End bp1951876 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID638118262 
Productarginyl-tRNA-protein transferase 
Protein accessionYP_733783 
Protein GI113969990 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2935] Putative arginyl-tRNA:protein arginylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000736484 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTCTA ACGCGAGTAA CACCCCCATA GCCATTGGGA TCAGCCAAAT CTTCCCCTGC 
AGTTATCTTG ATGGACAGCA GGAACAACTG TTGGTGATCC AAGAGGAAAC CCTCGACCCC
ATTTTATTTG ATCGTCTATT AGCCATAGGT TTTCGCCGCA GTGGCAGCGC CATTTATAAA
CCACGCTGTC CTCGTTGCAG TGCCTGTCAG CCAATTCGCT TACCAATTAA AGAATTTACA
CCGTCTAAAC GACAAAAGCG CACCTTAGCC CATAACCGTG ATTTAACTTG GCGCATTACC
TCTGAACATA CCGAGGCCCA ATATGCCCTG TATGAAAAAT ACATTCGTGA GCGCCACTTC
GATGGCCCCA TGTTTCCCCC GAGTAAGTCG CAGTATGAGC AATTTTTATT CTGCCATTGG
CTACCAGCAA CCTTTATCGA AGTCTATGAT GGCAATCGAC TTTTAGCCGT AGCAGTGACA
GATACTCTGC CCAATAGTCT GTCGGCTATT TACAGCTATT TTGACCCTGA TGAAGAACGC
CGATCCCTTG GCTCCTTACT GATTTTACTC CAGTGCCGTT TAGCAAAATT ACAGGATAAA
GAATTTCTTT ATCTCGGATA TCAAATTGAT GCAAATCGAA AAATGTCCTA CAAGCGCTTA
TACCGCCCTT ACCAGATTTT AACCCCCCAA GGCTGGGAGT ATTCCCAAGT TTGCTAG
 
Protein sequence
MNSNASNTPI AIGISQIFPC SYLDGQQEQL LVIQEETLDP ILFDRLLAIG FRRSGSAIYK 
PRCPRCSACQ PIRLPIKEFT PSKRQKRTLA HNRDLTWRIT SEHTEAQYAL YEKYIRERHF
DGPMFPPSKS QYEQFLFCHW LPATFIEVYD GNRLLAVAVT DTLPNSLSAI YSYFDPDEER
RSLGSLLILL QCRLAKLQDK EFLYLGYQID ANRKMSYKRL YRPYQILTPQ GWEYSQVC