| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1646 |
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| Symbol | |
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| ID | 4252222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1947735 |
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| End bp | 1947941 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638118258 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_733779 |
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| Protein GI | 113969986 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000452654 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGCG GAACTGTTAA ATGGTTCAAC AACGCCAAAG GATTCGGGTT TATTTGCCCT
GATCAAGGTG GCGAGGACGT TTTTGCACAC TATTCTACCA TTGAAATGGA AGGCTATAGA
ACTCTAAAAG CAGGCCAACC AGTTCAATTC GAAGTAGAAC AGGGTCCAAA AGGAATGCAC
GCTTCAGCCA TTTCACCAAC AAAATAA
|
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| Protein sequence | MASGTVKWFN NAKGFGFICP DQGGEDVFAH YSTIEMEGYR TLKAGQPVQF EVEQGPKGMH
ASAISPTK
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