Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1643 |
Symbol | |
ID | 4252219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1945440 |
End bp | 1945904 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118255 |
Product | hypothetical protein |
Protein accession | YP_733776 |
Protein GI | 113969983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000122978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG AGCCCATGAC GCAAAAACTG GCGATTATTA TGCGGGGATT ACCGGGCAGC GGTAAATCCC ATTGGGTCGA GCAGTTTGTG GCTAATCTAC CGTTAGAAGA GGCGATTCGC GTTCGCCAAG GCGGCATTTT TTCGACCGAT AGTTTTTTCT ACGAGGGAGA GGAGTATCGA TTCGATGCGA AAAAACTCTC CGAATACCAT CAACGTAATT TAACCGCGTT TATCCACGCG CTCAGTAGCG CTCAGCCAAT TGTGATTTGT GATAACACTA ATCTTTGCCG CTGGGAGTAC ATGGCCTATG AGGCTGCTGC GAAAGCCTTA GGTTATCAAG TGCGTATCGT ACTGGTAGGG GAGCCTTCAG CGCGCGCGCA TCAACAACTG TGCGCCGAGC GTAATCGTCA TGGTGTGCCG CTAAATCAAA TACGGCGTAT GGCAGCGCAG TTTGAGGCAT TCTAG
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Protein sequence | MSNEPMTQKL AIIMRGLPGS GKSHWVEQFV ANLPLEEAIR VRQGGIFSTD SFFYEGEEYR FDAKKLSEYH QRNLTAFIHA LSSAQPIVIC DNTNLCRWEY MAYEAAAKAL GYQVRIVLVG EPSARAHQQL CAERNRHGVP LNQIRRMAAQ FEAF
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