| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1630 |
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| Symbol | gltA |
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| ID | 4252206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1931216 |
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| End bp | 1932502 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118242 |
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| Product | type II citrate synthase |
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| Protein accession | YP_733763 |
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| Protein GI | 113969970 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.01465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATT TAAAAGCCAA ATTAGAATTA CCAGGGAACG ACTCGATAGA ATTGCCAGTA
AAGCAAGGAT CCGCTGGTTT TGACGTAATC GATATCAGTA AACTTGGCAG CAAGGGTTAC
TTCACTTTTG ATCCAGGTTT TCTCGCGACA GCCTCCTGTG AATCTGCAAT TACCTATATC
GATGGCGATC AAGGTATATT GTTACACCGC GGCTATCCAA TCGAGCAACT CGCCGTTGAC
TCAGATTACT TAGACCTGTG TTACCTGCTG CTTTACGGTG AACTGCCGAC GAAAGAGCAA
TATGCTGAAT TTGTACACAC AGTAAAAACC CACACTATGG TTCATGAGCA ACTCGCCTTC
TTCTTTAGAG GTTTCCGTCG TGATGCTCAT CCTATGGCGA TGTTATGTGG TGTCACTGGT
GCATTGTCTG CATTTTATCA AGACTCACTC GATGTCAACG ATCCTCGCCA CCGCGAAATC
GCCGCTTATC GCCTAGTCTC CAAAATGCCA ACGATTGCCG CTATGTGCTA CAAGTACTCT
TCTGGCCAGC CATTCGTTTA TCCACGCAAT GACTTAAGCT ACGCAGGCAA CTTCTTAAGC
ATGATGTTTG CCGTTCCTTG CGAAGAGTAC AAGGTAAACC CAATCGTTGA ACGTGCTATG
GATCGTATCT TCATTCTACA TGCGGATCAC GAACAAAACG CGTCAACGTC AACCGTACGT
TTAGCCGGTT CTTCAGGCGC GAATCCATTC GCGTGTATCG CTGCGGGTAT TGCTTCTCTA
TGGGGCCCTG CACACGGCGG CGCGAACGAA GCTTGTCTAC AAATGTTAGA AGAAATCGGT
TCAGTGGACC GTATTCCTGA ATTCATCGCC CGTGCGAAAG ACAAGAACGA CCCATTCCGT
CTGATGGGCT TCGGACACCG TGTTTACAAA AACTTTGACC CACGCGCCAA AGTCATGCGT
GAAACCTGTC ACGAAGTGTT AAAAGAGCTG AAAGTACAAG ATCCATTATT AGATGTTGCG
ATGGAACTTG AGCGTATCGC ATTGGAAGAC GAGTACTTCA TTTCGAAGAA ACTCTATCCA
AACGTCGATT TCTACTCTGG CATCATCATG AAAGCCATTG GTATTCCAAC TAGTATGTTC
ACTGTACTGT TTGCATTAGC ACGTACTGTG GGTTGGATTG CTCACTGGAA AGAAATGTTG
GATCAACCTG GTCACAAGAT CAGCCGTCCA CGTCAGCTAT ATACTGGCGA GACTGCGCGT
GACTTCGTTA GCCAAGATAA ACGCTAA
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| Protein sequence | MADLKAKLEL PGNDSIELPV KQGSAGFDVI DISKLGSKGY FTFDPGFLAT ASCESAITYI
DGDQGILLHR GYPIEQLAVD SDYLDLCYLL LYGELPTKEQ YAEFVHTVKT HTMVHEQLAF
FFRGFRRDAH PMAMLCGVTG ALSAFYQDSL DVNDPRHREI AAYRLVSKMP TIAAMCYKYS
SGQPFVYPRN DLSYAGNFLS MMFAVPCEEY KVNPIVERAM DRIFILHADH EQNASTSTVR
LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLQMLEEIG SVDRIPEFIA RAKDKNDPFR
LMGFGHRVYK NFDPRAKVMR ETCHEVLKEL KVQDPLLDVA MELERIALED EYFISKKLYP
NVDFYSGIIM KAIGIPTSMF TVLFALARTV GWIAHWKEML DQPGHKISRP RQLYTGETAR
DFVSQDKR
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