| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1628 |
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| Symbol | |
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| ID | 4252204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1926579 |
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| End bp | 1929842 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118240 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_733761 |
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| Protein GI | 113969968 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCA TCAGCACCTC AGTTAAACGG CCAGTCACGG TATGGATGTT CATGCTGGCC
ATTATGTTAT TCGGTATGGT GGGGTTTTCG CGCTTAGCAG TAAAACTCCT GCCCGATTTA
AGCTACCCCA CCTTGACCAT TAGAACCATG TACGACGGTG CCGCGCCCGT TGAAGTGGAG
CAATTGGTTT CAAAACCCAT TGAAGAAGCC GTCGGTGTGG TGAAAGGCTT GCGTAAGATA
AGCTCTATCT CCCGCTCAGG CATGTCTGAT GTGGTACTCG AGTTCGAATG GGGTACCACT
ATGGATATGG CAAGTCTCGA TGTGCGTGAA AAACTCGACA CTATCGCCCT GCCACTGGAT
GTTAAAAAGC CATTATTGCT GCGCTTTAAC CCCAACCTAG ACCCTATTAT GCGCCTCGCG
CTATCGGTAC CTAATGCGTC TGAGGCTGAA CTCAAGCAGA TGCGTACCTA CGCCGAGGAA
GAACTTAAAC GCCGTTTAGA AGCTCTTTCA GGTGTAGCAG CGGTGCGTTT ATCCGGTGGC
TTAGAGCAGG AAGTGCATAT TCAGCTCAAT CAGGAAAAAT TATCCCAGCT CAATTTGAAT
GCCGACGACA TTAAACGCCG CATCAACGAG GAAAACATCA ACTTATCTGC GGGTAAAGTG
ATCCAAGGTG ACCGCGAATA TCTGGTTCGT ACCCTTAACC AATTCAATTC ATTGGAAGAA
CTAGGGCAAG TGATCGTCTA TCGCGACGCA CAGACCTTAG TACGTCTATT TGAAGTTGCG
ACCATTACCG ATGCCTTTAA AGAGCGTAGC GACATCACCC GTATCGGTAG CCAAGAGTCG
ATTGAACTGG CTATCTATAA GGAAGGTGAT GCTAACACGG TCGCGGTGGC TAAAAAGCTG
CGCGATGAGC TAGTCAAAAT CAACCAAGAT CCTAAGCAAA ACAAACTGGA AGTGATTTAC
GACCAGTCCG AGTTTATTGA GAGTGCCGTT AGCGAAGTCA CCTCATCTGC ACTGATGGGC
AGCATTTTGT CTATGTTGGT GATTTACCTG TTCCTGCGCA ATATTATCCC GACGCTGATT
ATCTCTATCT CCATCCCCTT CTCGGTGATT GCCACCTTTA ACATGATGTA TTTTGCCGAT
ATCAGCTTAA ACATCATGTC ATTAGGCGGT ATTGCGCTCG CTATCGGTCT ATTGGTCGAC
AACGCCATTG TGGTGCTGGA GAACATCGAC CGCTGCCGCA GCGAAGGCAT GAGTAAGTTA
GATGCGGCTG TCACAGGGAC TAAAGAAGTA GCGGGCGCGA TTTTCGCCTC GACCATGACT
ACACTCGCAG TGTTTGTCCC CTTGGTATTT GTCGATGGTA TTGCGGGCGC CCTATTCTCT
GATCAAGCCC TCACAGTGAC CTTTGCCTTG CTCGCATCAC TCTTGGTGGC ACTAACCTCA
ATTCCAATGT TGGCCTCCCG CGAAGGCTTT ACAGCACTGC CCGAACTCAT CAAGAAGACC
CCAAAGGAGA AACCCACGAC TAAGCTCGGT AAGTTAAAAC ACTATAGTGC GACGGTATTT
TCCTTCCCGA TTGTGTTGAT CTTTAGCTAC TTACCGAGTG TATTGCTGAC TTTAGCGTTA
GTCATTGGCC GCTTCTTTTC TTGGCTGCTC GGGTTAGTAA TGCGCCCGCT CAGCAGTGGT
TTTAACTTTG TTTACCACGC TATCGAGTCG GTTTATCACA AACTGCTCGC GATGGCGCTA
CGTAAACAAG TCGCCACTTT GTTACTGACC ATAGGGATCA CTGGCGCCTG TATTAGCTTG
CTGCCCCGCC TTGGCATGGA GCTCATCCCA CCGATGAACC AAGGGGAGTT TTATGTGGAG
ATCCTGCTGC CTCCTGGCAC TGCGGTCGGT GAAACAGACA AAGTACTGCA ACAACTCGCG
ATGTCGATTA AAGACAGACC CGAAGTCAAA CATGCTTACA GCCAAGCGGG CAGCGGCGGT
CTAATGACCT CTGATACCGC CAGAGGCGGT GAAAACTGGG GGCGTTTACA GGTCGTACTC
AGCGATCACA CGGCTTACCA CCAAGTAACA CAAGTGCTGC GTGACACCGC GCGCCGCATT
CCTGAGCTGG AAGCTAAAAT CGAGCAACCT GAACTCTTTA GCTTTAAAAC CCCATTGGAG
ATTGAGCTTT CGGGTTACGA TTTACACTTG CTTAAGCGCA GTGCCGATAA TCTGGTTAAG
GCGCTTTCCG CCTCCGATCG CTTTGCCGAT GTGAATACTA GCCTGCGTGA CGGTCAGCCA
GAACTCAGTA TTCGCTTCGA CCATGCCCGC TTAGCCGCCT TAGGCATGGA TGCGCCCACA
GTCGCCAATC GTATTGCCCA GCGCGTTGGC GGTACAGTTG CCAGCCAATA CACAGTCCGC
GACCGCAAAA TTGATATTTT AGTGCGTAGC GAACTGGATG AGCGGGATCA AATCAGTGAT
ATCGATGCGC TAATCATCAA CCCGAACAGC CAGCAACCGA TTGCCCTAAG CGCCGTGGCC
GAAGTGTCAT TGCAATTAGG CCCATCGGCG ATTAACCGCA TCAGCCAACA ACGAGTGGCC
TTAGTATCGG CCAACCTTGC CTATGGCGAC TTAAGTGATG CGGTGGCCGA AGCGCAGCAA
ATTCTGTCTG CACAGGTGTT GCCCGCCTCG GTTCAAGCAC GCTTTGGTGG ACAAAATGAG
GAAATGGAGC ATTCATTCCA ATCACTGAAG ATTGCGCTGA TCCTGGCGGT TTTCCTGGTG
TACTTAGTGA TGGCGAGTCA ATTCGAATCA CTGCTGCATC CGCTGCTAAT TTTATTCGCC
GTGCCGATGG CGCTGGCAGG TAGCGTGCTT GGTCTTTATA TCACCCAAAC CCATTTGAGT
GTGGTGGTGT TTATCGGCCT TATCATGCTC GCGGGGATTG TGGTCAACAA CGCCATCGTA
CTGGTAGATA GAATTAATCA GCTGCGCACC GAAGGCGTGG ACAAGCTTGA GGCCATTAAG
GTCGCGGCCA AATCCCGTCT GCGCCCGATT ATGATGACCA CCTTAACCAC CACTTTAGGT
TTGCTGCCAA TGGCGTTAGG TTTAGGCGAT GGCTCAGAAG TCCGCGCACC GATGGCGATT
ACCGTGATCT TTGGTCTGAG CCTCTCGACC CTGTTGACCC TGATTGTTAT CCCTGTGCTC
TATGCCCTGT TTGACCGTAA AAAGTTTGAA CATACCGCCA CAGCGCAAGA CAACACGGCC
GAAACCGCGG AGGCTCGCCT ATGA
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| Protein sequence | MSIISTSVKR PVTVWMFMLA IMLFGMVGFS RLAVKLLPDL SYPTLTIRTM YDGAAPVEVE
QLVSKPIEEA VGVVKGLRKI SSISRSGMSD VVLEFEWGTT MDMASLDVRE KLDTIALPLD
VKKPLLLRFN PNLDPIMRLA LSVPNASEAE LKQMRTYAEE ELKRRLEALS GVAAVRLSGG
LEQEVHIQLN QEKLSQLNLN ADDIKRRINE ENINLSAGKV IQGDREYLVR TLNQFNSLEE
LGQVIVYRDA QTLVRLFEVA TITDAFKERS DITRIGSQES IELAIYKEGD ANTVAVAKKL
RDELVKINQD PKQNKLEVIY DQSEFIESAV SEVTSSALMG SILSMLVIYL FLRNIIPTLI
ISISIPFSVI ATFNMMYFAD ISLNIMSLGG IALAIGLLVD NAIVVLENID RCRSEGMSKL
DAAVTGTKEV AGAIFASTMT TLAVFVPLVF VDGIAGALFS DQALTVTFAL LASLLVALTS
IPMLASREGF TALPELIKKT PKEKPTTKLG KLKHYSATVF SFPIVLIFSY LPSVLLTLAL
VIGRFFSWLL GLVMRPLSSG FNFVYHAIES VYHKLLAMAL RKQVATLLLT IGITGACISL
LPRLGMELIP PMNQGEFYVE ILLPPGTAVG ETDKVLQQLA MSIKDRPEVK HAYSQAGSGG
LMTSDTARGG ENWGRLQVVL SDHTAYHQVT QVLRDTARRI PELEAKIEQP ELFSFKTPLE
IELSGYDLHL LKRSADNLVK ALSASDRFAD VNTSLRDGQP ELSIRFDHAR LAALGMDAPT
VANRIAQRVG GTVASQYTVR DRKIDILVRS ELDERDQISD IDALIINPNS QQPIALSAVA
EVSLQLGPSA INRISQQRVA LVSANLAYGD LSDAVAEAQQ ILSAQVLPAS VQARFGGQNE
EMEHSFQSLK IALILAVFLV YLVMASQFES LLHPLLILFA VPMALAGSVL GLYITQTHLS
VVVFIGLIML AGIVVNNAIV LVDRINQLRT EGVDKLEAIK VAAKSRLRPI MMTTLTTTLG
LLPMALGLGD GSEVRAPMAI TVIFGLSLST LLTLIVIPVL YALFDRKKFE HTATAQDNTA
ETAEARL
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