| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1623 |
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| Symbol | |
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| ID | 4252199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1919763 |
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| End bp | 1921325 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118235 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_733756 |
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| Protein GI | 113969963 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG CCAAATTCGT TGAAGGTTCG ATTCTTCGTC ATATCCTGGT GATGAGTTCG
ACCGCCGCGG TGGGGATTTC TGCCTTATTT GTGGTCGATT TACTCGATAT TTTCTTCTTA
AGTTTACTCG GCGAACATGA ACTGGCCGCG GCGGTGGGCT ATGCGGGCAG TATTTCGTTT
TTTACGACTT CTATTGGTAT CGGCCTCTCG ATTGCGCTCG GCGCGTTAGT ATCCCGCTCG
ATTGGTGCAA AGGATGTCGA GTTAGCTAAA CGCCTCTTGC TCAATAGTGC GGCGGTGACC
ACCCTAATCA GCCTTTTTGT GAGTGTGGTG GTGACCTGTT TTATCCCCGA ATTAGTGACT
TTGGTAGGGG CGAGCGGCCA TACCGCGGAA CTTGCCGAGA GTTATCTGTA CATTTTGGTG
CCTTCTTTAC CCTTTATTTG CCTTGCGATG GCCCTTGGCG GTGCGCTGCG TGCCGTTGGG
GATGCCAAGC TGTCGATGAT GTCGACCTTA GCGGGCGGCG GCGTTAATGC TGTGCTGGAT
CCGATTTTTA TTTTCCTGTT TGCCATGGGG ATTGAAGGCG CGGCACTGGC GTCGGTCCTT
GCCCGTATAG CGGTCTTTAT CATTGCCGGG CGCGGTGTTG TGGTAAAACA TCAACTGCTA
GGCAAATTTA ACTTCAGCTA TTTTGTTGCC GATCTCAAAC CGATTTTCGC TATTGCCGGG
CCTGCCATGC TGACGAATAT CGCGACGCCC ATTGGTAACG CCTTTGTGAC CCGCGCGATT
GCGGATTTTG GTGATGCCTA TGTGGCCGGT TGGGCGGTGC TTGGCAGGTT AGTCCCGGTC
ACCTTTGGGA TGATTTTTGC GTTATCCGGC GCCATTGGGC CGATTGTTGG GCAAAACTTT
GGGGCGGGTC GATTCGACCG GGTGCGCGAG AGTTTAACCA AGGCGATTCA ATTTTGTACC
TTGTATGTGG TGGTGATGTC GCTGCTGCTG TTCTTGCTCA AATCGCAGGT GGTGAGCCTG
TTCGATATGA AAGGCGATAG CGCGGCGCTT ATCGAGTTTT TCTGTAGCTA TATCGCGGTG
TTTTTTACCT TCTCTGGCAT TTTATTTGTG GCCAATGCTT CGTTTAATAA TCTGGGCAAA
GCGAAATACT CCACCTTGTT CAACGTCGGT AAAGCCACGT TAGGGACTGT GCCATTTGTG
TATTTTGGCG CCCAGTGGGG CGGGGTATAC GGTGTGTTAA TCGGCCAAGT ATTGGGCTCG
ATTCTGTTTG GGATTATGGG TGTGTGGGTG GCCTACCGAT TAGTCGATAA AGTCGCACTG
GCAAGCCGCG CGAGCGTGGC ACAGCCCTTG GGGAACGAAA CCGAAGAGGC GCAGGCTAAG
TGCCAGCAAC TGCTGGCGGG GGATGAGGAA GAAATTGCCA ATTGTGTTGG CCAAAATCTG
CCCTCATCTA CGAGTCCGTT TTCATCCTCC CATGTGCAAA TGGGCCAATT GACCGAAGAG
CAGGAATGCG AGGCGGCCAC GGCAGCGGTG GATTTTGATA AAGCAAAACC GAATACGCCG
TAA
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| Protein sequence | MTQAKFVEGS ILRHILVMSS TAAVGISALF VVDLLDIFFL SLLGEHELAA AVGYAGSISF
FTTSIGIGLS IALGALVSRS IGAKDVELAK RLLLNSAAVT TLISLFVSVV VTCFIPELVT
LVGASGHTAE LAESYLYILV PSLPFICLAM ALGGALRAVG DAKLSMMSTL AGGGVNAVLD
PIFIFLFAMG IEGAALASVL ARIAVFIIAG RGVVVKHQLL GKFNFSYFVA DLKPIFAIAG
PAMLTNIATP IGNAFVTRAI ADFGDAYVAG WAVLGRLVPV TFGMIFALSG AIGPIVGQNF
GAGRFDRVRE SLTKAIQFCT LYVVVMSLLL FLLKSQVVSL FDMKGDSAAL IEFFCSYIAV
FFTFSGILFV ANASFNNLGK AKYSTLFNVG KATLGTVPFV YFGAQWGGVY GVLIGQVLGS
ILFGIMGVWV AYRLVDKVAL ASRASVAQPL GNETEEAQAK CQQLLAGDEE EIANCVGQNL
PSSTSPFSSS HVQMGQLTEE QECEAATAAV DFDKAKPNTP
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