| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1622 |
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| Symbol | |
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| ID | 4252198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1918076 |
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| End bp | 1919386 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118234 |
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| Product | major facilitator transporter |
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| Protein accession | YP_733755 |
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| Protein GI | 113969962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.227848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATGCC CAGTGCTAAT CTTTGTCTAT CCTGAGAGTG ATGCGTTATC GAGGCCAAAA
GTGCAAGCCG TGTTAGACAC TATTATCGAC AGTAAACAAC GTGATACCCG ACTGATGTGG
GCCCTGTGTG TGGCTTCCGT GGTGGTGTAT ATCAATCTGT ATTTGATGCA GGGCATGTTA
CCGCTGATCG CCGAGCATTT TGCGGTATCG GGCTCTAAGG CAACCCTTAT CCTTTCGGTT
ACCAGCTTTT CGCTGGCGTT TTCGCTGTTA ATTTATGCGG TTGTGTCCGA CAGAATTGGC
CGCCACACGC CGATTGTCGT GAGTCTCTGG CTACTGGCGC TGTCGAATCT GCTGTTGATT
TGGGCTGGGG ATTTTAATGC TCTTGTCTAC GTACGCTTTT TACAGGGCGT GCTGTTAGCG
GCGGTGCCCG CCATTGCAAT GGCCTATTTT AAGGAGCAAC TCTCGCCAAG CACTATGCTC
AAAGCCGCGG GTATTTATAT CATGGCCAAC AGTATCGGCG GGATTGTCGG TCGGTTACTG
GGCGGGGTGA TGTCGCAGTT TTTATCTTGG CAAGAGTCCA TGTGGCTGCT GTTTTTAGTC
ACGCTTGCGG GCGTTGCCTT AACCAGTTAT TTATTGCCTT CTGGCGCCGA TGCACAGGCG
GTATCGGGCG GACAAACCAC CTCGCCAACA CTGTCAAAAC GGGCACGTTT ATTACAGGAT
ATTTATGGCT TTAGCCATCA CCTAACCGAT CCGCAGATGC GTTTAGCCTA TGCCATCGGT
GGGATCACTT TTATGATGAT GGTGAATCAA TTTAGCTTTA TTCAGCTGCA TTTGATGGCC
GCACCCTACG AGTGGAGCCG TTTCCAAGCG ACGTTGATCT TCCTGTGTTA TTCCAGTGGT
ACCGTGGCTT CTTATTTTAC TGCCAAATGG CTGGCCAAAT TTGGTCAGCA CAAGTTATAC
CAATGGTCTT GGTGCTTGAT GTTACTGGGC AGTTTATTGA CCCTGTTCGA TACTCCAGTC
ACGATTTGTC TGGGCTTTTT GATGACGGCC TGTGGCTTTT TCCTAACCCA CAGCTGCTGC
AATTCTTTTG TGGCGATGCG CGCGAGTCGC GACCGCGCTA AAGCCACCTC ACTGTATCTG
TGTTGCTATT ACTTAGGCGC CGCGCTGGGC GGGCCTTACT TGATGCTGTT TTGGCATAAA
GCCGAGTGGC AGGGGGTAGT GATGGGATCA TTAACACTCC TTGCCTTGAT AGCCTTGTCG
ATTGCGCGTT TGCGTTATCA CCAGACCCAA ATGAACCGCG TCGAGGTATA G
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| Protein sequence | MLCPVLIFVY PESDALSRPK VQAVLDTIID SKQRDTRLMW ALCVASVVVY INLYLMQGML
PLIAEHFAVS GSKATLILSV TSFSLAFSLL IYAVVSDRIG RHTPIVVSLW LLALSNLLLI
WAGDFNALVY VRFLQGVLLA AVPAIAMAYF KEQLSPSTML KAAGIYIMAN SIGGIVGRLL
GGVMSQFLSW QESMWLLFLV TLAGVALTSY LLPSGADAQA VSGGQTTSPT LSKRARLLQD
IYGFSHHLTD PQMRLAYAIG GITFMMMVNQ FSFIQLHLMA APYEWSRFQA TLIFLCYSSG
TVASYFTAKW LAKFGQHKLY QWSWCLMLLG SLLTLFDTPV TICLGFLMTA CGFFLTHSCC
NSFVAMRASR DRAKATSLYL CCYYLGAALG GPYLMLFWHK AEWQGVVMGS LTLLALIALS
IARLRYHQTQ MNRVEV
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