| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1618 |
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| Symbol | |
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| ID | 4252194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1914589 |
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| End bp | 1915542 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118230 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_733751 |
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| Protein GI | 113969958 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG ATAATCGAGT GGCGTTGGTA ACGGGAGCAG GCTCCGGGCT AGGGAGAGCC
TATGCCATTA TGTTGGCTGA GCGGGGCGCC AAACTGGTAT TAGTTGACCA ACCTAAGGGA
AGTCCATCCC AAGGCGAGGC ATTGAGGGCA ACTAGCTCTT CTAACTTAAC TCATGCAACT
AACGCAGAGC TGCAGCAAAC CCATCAGGCC ATTTTAAAGC TTGGGGGAGA ATGCCTGTAT
TTTGAAGTAG ATGTTAGCCA GCAGGATGAT GTCAAGGTGA TGGTGAATCG TCTACAGCAA
GATTGGCAAC GCGTGGATAT TTTGATCAAT AACGCAGGGG TTTACGGCGC GTGCTCCTTC
GAGCATATCC AACAAGCCGA CTGGCAGCGA CAGTTTCATG TGGATGTGAA CGGCAGTTTT
TATCTTACTC AGGCCCTGTG GCCGCTGATG AAGACCCATG GTTATGGCCG AATTTTGATG
ACCACGGGGG TGTCGGCGTT GTTTGGCGAC TTACATCAGG TTCCGTTCAG CGCTGCCAAG
ATGGCTCTCG TCGGTATGGT GAATAGCCTT TCCTTAGAGG GCGAGCAGTA TAACATCCAT
ATCAATAGCC TGTGCCCGCA GGCACTCACG GCCATGACCG ATAAACACTT AGCCCCAGCG
ATTCAACCGC TTTTTTCCTT TGATACTGTC ACGGCGACTA TGGCATTTTT AGTCAGTGGT
GCTGCGCCTA ATGGCCAGCA TCTGCTCGCG GGGGCGGGCA GTGTGAGTCA TGGGATGTTT
GCCGAATTTC AGTCCATCTA TTTCAGTGAG GGGCTGTGTA CACCTGATAA ACTGGTCAAG
TACTGGCCCG AGTTGCATTA TGCCTTTCCG ATTAATTTGC ATACCTGCGG CGAAGATAAA
GTGCTGGCTT GGTCAAAACA GAGTGCCCTT GAGCATCATA TTAAAATTGA GTAG
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| Protein sequence | MRFDNRVALV TGAGSGLGRA YAIMLAERGA KLVLVDQPKG SPSQGEALRA TSSSNLTHAT
NAELQQTHQA ILKLGGECLY FEVDVSQQDD VKVMVNRLQQ DWQRVDILIN NAGVYGACSF
EHIQQADWQR QFHVDVNGSF YLTQALWPLM KTHGYGRILM TTGVSALFGD LHQVPFSAAK
MALVGMVNSL SLEGEQYNIH INSLCPQALT AMTDKHLAPA IQPLFSFDTV TATMAFLVSG
AAPNGQHLLA GAGSVSHGMF AEFQSIYFSE GLCTPDKLVK YWPELHYAFP INLHTCGEDK
VLAWSKQSAL EHHIKIE
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