Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1604 |
Symbol | |
ID | 4252181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1899631 |
End bp | 1900122 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118217 |
Product | NUDIX hydrolase |
Protein accession | YP_733738 |
Protein GI | 113969945 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00941783 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGAAA AACTCAGATA CAAACCCAAT GTGACTGTGG CCTGTATTAT CCACGCGCCT ACCGAAGATA AGTATCTGTT AGTGGAAGAG TGGATCGATG GCGAGCAGCG CTTTAACCAG CCCGCCGGAC ATTTAGAAGC GAATGAGAGT CTGATCCAAG CCTGTAAACG TGAAGTGCTC GAAGAAACGG GGCTGAATCT TGAGCCCCAA GGCTTAGTGG GGATTTATCA GTTTAGTGCC AGTGAAGCAC TCGCTTTTGT GCGCTTTACC TTTTTCGTAC AAGTTGATGC ACTGCTCCCC CCTCAGCCAC AGGATGCGGA TATCGATGCA GCCCATTGGC TGAGCTTTGA GCAAATCGAA GCCAAAATGG AGCAGCTTCG TAGCCCATTG GTGCTCGATT GCCTTAGGGA TTACCGCCAT CAGCAGCAAC AGGAGCAAAC CTACTCTCTC GAATTACTCA ATAGTCAGCG TCTAACGGGA TGTCAAAGAT AG
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Protein sequence | MAEKLRYKPN VTVACIIHAP TEDKYLLVEE WIDGEQRFNQ PAGHLEANES LIQACKREVL EETGLNLEPQ GLVGIYQFSA SEALAFVRFT FFVQVDALLP PQPQDADIDA AHWLSFEQIE AKMEQLRSPL VLDCLRDYRH QQQQEQTYSL ELLNSQRLTG CQR
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