Gene Shewmr4_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1604 
Symbol 
ID4252181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1899631 
End bp1900122 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID638118217 
ProductNUDIX hydrolase 
Protein accessionYP_733738 
Protein GI113969945 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00941783 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGAAA AACTCAGATA CAAACCCAAT GTGACTGTGG CCTGTATTAT CCACGCGCCT 
ACCGAAGATA AGTATCTGTT AGTGGAAGAG TGGATCGATG GCGAGCAGCG CTTTAACCAG
CCCGCCGGAC ATTTAGAAGC GAATGAGAGT CTGATCCAAG CCTGTAAACG TGAAGTGCTC
GAAGAAACGG GGCTGAATCT TGAGCCCCAA GGCTTAGTGG GGATTTATCA GTTTAGTGCC
AGTGAAGCAC TCGCTTTTGT GCGCTTTACC TTTTTCGTAC AAGTTGATGC ACTGCTCCCC
CCTCAGCCAC AGGATGCGGA TATCGATGCA GCCCATTGGC TGAGCTTTGA GCAAATCGAA
GCCAAAATGG AGCAGCTTCG TAGCCCATTG GTGCTCGATT GCCTTAGGGA TTACCGCCAT
CAGCAGCAAC AGGAGCAAAC CTACTCTCTC GAATTACTCA ATAGTCAGCG TCTAACGGGA
TGTCAAAGAT AG
 
Protein sequence
MAEKLRYKPN VTVACIIHAP TEDKYLLVEE WIDGEQRFNQ PAGHLEANES LIQACKREVL 
EETGLNLEPQ GLVGIYQFSA SEALAFVRFT FFVQVDALLP PQPQDADIDA AHWLSFEQIE
AKMEQLRSPL VLDCLRDYRH QQQQEQTYSL ELLNSQRLTG CQR