Gene Shewmr4_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1598 
Symbol 
ID4252175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1893140 
End bp1894174 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID638118211 
Productleucine dehydrogenase 
Protein accessionYP_733732 
Protein GI113969939 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTAT TTAATCATGT ATCCTTTGAC GAGCATGAAC AGGTCGTATT CTGTCATGAT 
AAAGAGAGTG GCTTAAAGGC CATCGTCGCC ATCCATAACA CCAACTTAGG TCCTGCTGTG
GGTGGCTGCC GGATGTGGAA CTACCAATCC GATGATGAAG CCCTGACAGA CGTATTACGC
CTCTCCCGTG GTATGACTTA CAAAAACGCT CTCGCCGGTT TAACCATGGG CGGTGGTAAG
TCAGTGATTA TTGCCGATCC TAAGCGCCCT GATCGCGAAG CCCTCTTCCG TGCTTTTGGC
CGTTTTATCA ATAGCCTGGG TGGACGTTAC TATTCAGCAG AAGACGTAGG TACCACAACA
GCAGATATCA TGATCGCTCA CCAAGAAACC CCCTACATGG CAGGTCTTGA AGGCAAGAGT
GGCGACCCAT CCCCCTTTAC TGCATTAGGC ACCTATTTAG GCATCAAAGC TGCCGTTAAA
CACAAACTCG GTTTGGACAG CTTAAAAGGC CTTAAGATTG CCGTTCAAGG TGTGGGCCAT
GTGGGTTACT ACCTGTGTAA GCATCTGCAT GAAGAAGGTG CAGAGCTTAT CGTTACCGAT
ATTCACCAAG CTTCACTCGA CAAAGTGGCT ACCGACTTTG GTGCCATCGT CGTTGCCCCA
CAGGATATCT ATGCCCAAGA CGTTGATGTC TATGCGCCAT GTGCATTAGG TGCCACCCTA
AACGATGTCA CCCTGCCACA GCTTAAAGCT AAAATTGTTG CGGGTTGCGC TAACAACCAA
TTAGCCGAAG TTCGCCATGG CGAGCAGTTA AAAGAAATGG GCATTCTGTA TGCACCAGAC
TATGTGATTA ACGCTGGCGG TATCATCAAC GTGTCATTTG AAAAAGACTA TGACGCGGCG
AAATCAGAAG CTAAGGTCAG AGAAATCTAC AACACATTGC TGAAGATTTT CACTAAGGCC
GATGCTGAAA ACCGTACTAC TGCTGCGGTT GCTGACGAAA TGGCCCGTGC CATTTATCAA
GCGGCAAAAG ACTAA
 
Protein sequence
MAVFNHVSFD EHEQVVFCHD KESGLKAIVA IHNTNLGPAV GGCRMWNYQS DDEALTDVLR 
LSRGMTYKNA LAGLTMGGGK SVIIADPKRP DREALFRAFG RFINSLGGRY YSAEDVGTTT
ADIMIAHQET PYMAGLEGKS GDPSPFTALG TYLGIKAAVK HKLGLDSLKG LKIAVQGVGH
VGYYLCKHLH EEGAELIVTD IHQASLDKVA TDFGAIVVAP QDIYAQDVDV YAPCALGATL
NDVTLPQLKA KIVAGCANNQ LAEVRHGEQL KEMGILYAPD YVINAGGIIN VSFEKDYDAA
KSEAKVREIY NTLLKIFTKA DAENRTTAAV ADEMARAIYQ AAKD