Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1598 |
Symbol | |
ID | 4252175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1893140 |
End bp | 1894174 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118211 |
Product | leucine dehydrogenase |
Protein accession | YP_733732 |
Protein GI | 113969939 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGTAT TTAATCATGT ATCCTTTGAC GAGCATGAAC AGGTCGTATT CTGTCATGAT AAAGAGAGTG GCTTAAAGGC CATCGTCGCC ATCCATAACA CCAACTTAGG TCCTGCTGTG GGTGGCTGCC GGATGTGGAA CTACCAATCC GATGATGAAG CCCTGACAGA CGTATTACGC CTCTCCCGTG GTATGACTTA CAAAAACGCT CTCGCCGGTT TAACCATGGG CGGTGGTAAG TCAGTGATTA TTGCCGATCC TAAGCGCCCT GATCGCGAAG CCCTCTTCCG TGCTTTTGGC CGTTTTATCA ATAGCCTGGG TGGACGTTAC TATTCAGCAG AAGACGTAGG TACCACAACA GCAGATATCA TGATCGCTCA CCAAGAAACC CCCTACATGG CAGGTCTTGA AGGCAAGAGT GGCGACCCAT CCCCCTTTAC TGCATTAGGC ACCTATTTAG GCATCAAAGC TGCCGTTAAA CACAAACTCG GTTTGGACAG CTTAAAAGGC CTTAAGATTG CCGTTCAAGG TGTGGGCCAT GTGGGTTACT ACCTGTGTAA GCATCTGCAT GAAGAAGGTG CAGAGCTTAT CGTTACCGAT ATTCACCAAG CTTCACTCGA CAAAGTGGCT ACCGACTTTG GTGCCATCGT CGTTGCCCCA CAGGATATCT ATGCCCAAGA CGTTGATGTC TATGCGCCAT GTGCATTAGG TGCCACCCTA AACGATGTCA CCCTGCCACA GCTTAAAGCT AAAATTGTTG CGGGTTGCGC TAACAACCAA TTAGCCGAAG TTCGCCATGG CGAGCAGTTA AAAGAAATGG GCATTCTGTA TGCACCAGAC TATGTGATTA ACGCTGGCGG TATCATCAAC GTGTCATTTG AAAAAGACTA TGACGCGGCG AAATCAGAAG CTAAGGTCAG AGAAATCTAC AACACATTGC TGAAGATTTT CACTAAGGCC GATGCTGAAA ACCGTACTAC TGCTGCGGTT GCTGACGAAA TGGCCCGTGC CATTTATCAA GCGGCAAAAG ACTAA
|
Protein sequence | MAVFNHVSFD EHEQVVFCHD KESGLKAIVA IHNTNLGPAV GGCRMWNYQS DDEALTDVLR LSRGMTYKNA LAGLTMGGGK SVIIADPKRP DREALFRAFG RFINSLGGRY YSAEDVGTTT ADIMIAHQET PYMAGLEGKS GDPSPFTALG TYLGIKAAVK HKLGLDSLKG LKIAVQGVGH VGYYLCKHLH EEGAELIVTD IHQASLDKVA TDFGAIVVAP QDIYAQDVDV YAPCALGATL NDVTLPQLKA KIVAGCANNQ LAEVRHGEQL KEMGILYAPD YVINAGGIIN VSFEKDYDAA KSEAKVREIY NTLLKIFTKA DAENRTTAAV ADEMARAIYQ AAKD
|
| |