Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1594 |
Symbol | |
ID | 4252171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1887400 |
End bp | 1887891 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638118207 |
Product | hypothetical protein |
Protein accession | YP_733728 |
Protein GI | 113969935 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.1666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGC ACACAGAGAA TGTCATCGAC ACGCTACAGG AATTCACCAA TAAGCCAAGG TCGAATGAAG TCTTAACACG GCCAACTGAG CTGTGTAGTG AAGTACCGCT ATTTCATATC CAGTTATCCG GTGAATGGCT ATATCAAGGC AGCCCATTAC CGACGAAGTT TGCCAAGTTA TTTGCCAGTA TTTTGCATGA CATCGATGGT GAGCATTTTC TCATTACGCC AGTCGAGAAG GTACGTCTCG AGGTGGAAGA TGCGCCGCTG GTGATTGTCG ATTATCTAAA GAATGAGACT GCACCGGGTT TTATGCTGAA AACCAGTATT GGAACTGAGC ACCATATTGC CGACTTCAAT CGACTAAGAC TGACCGACTT TGGGATTTAT CTGCCCCTAG AACGTGGTCT ATGGGGAAAA TTAAGTCGCG CTTGCTACTA CAATTTTGTG AATGAATTCA ATTTATCCGA CGCAGAGGGA CTCGGCGCTT AA
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Protein sequence | MEKHTENVID TLQEFTNKPR SNEVLTRPTE LCSEVPLFHI QLSGEWLYQG SPLPTKFAKL FASILHDIDG EHFLITPVEK VRLEVEDAPL VIVDYLKNET APGFMLKTSI GTEHHIADFN RLRLTDFGIY LPLERGLWGK LSRACYYNFV NEFNLSDAEG LGA
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