Gene Shewmr4_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1594 
Symbol 
ID4252171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1887400 
End bp1887891 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID638118207 
Producthypothetical protein 
Protein accessionYP_733728 
Protein GI113969935 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.1666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC ACACAGAGAA TGTCATCGAC ACGCTACAGG AATTCACCAA TAAGCCAAGG 
TCGAATGAAG TCTTAACACG GCCAACTGAG CTGTGTAGTG AAGTACCGCT ATTTCATATC
CAGTTATCCG GTGAATGGCT ATATCAAGGC AGCCCATTAC CGACGAAGTT TGCCAAGTTA
TTTGCCAGTA TTTTGCATGA CATCGATGGT GAGCATTTTC TCATTACGCC AGTCGAGAAG
GTACGTCTCG AGGTGGAAGA TGCGCCGCTG GTGATTGTCG ATTATCTAAA GAATGAGACT
GCACCGGGTT TTATGCTGAA AACCAGTATT GGAACTGAGC ACCATATTGC CGACTTCAAT
CGACTAAGAC TGACCGACTT TGGGATTTAT CTGCCCCTAG AACGTGGTCT ATGGGGAAAA
TTAAGTCGCG CTTGCTACTA CAATTTTGTG AATGAATTCA ATTTATCCGA CGCAGAGGGA
CTCGGCGCTT AA
 
Protein sequence
MEKHTENVID TLQEFTNKPR SNEVLTRPTE LCSEVPLFHI QLSGEWLYQG SPLPTKFAKL 
FASILHDIDG EHFLITPVEK VRLEVEDAPL VIVDYLKNET APGFMLKTSI GTEHHIADFN
RLRLTDFGIY LPLERGLWGK LSRACYYNFV NEFNLSDAEG LGA