| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1593 |
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| Symbol | |
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| ID | 4252170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1884264 |
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| End bp | 1887305 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118206 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_733727 |
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| Protein GI | 113969934 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.125155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.43288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCTC TGTTATCACA CCAACAAACG TTAGAACCAG TCTATTTGGC CTATCTTGAT
GCCTTAGCGC AAAGTGGCTA CGCCGGTGAT ATCGATAAGC GCTACAGCGC GCGCCTCGTG
CAGGCCACGG ATAACTCCGT GTACCAATTT TTGCCGCAGG CGGTGCTTTA TCCCAAGCAT
CAAAAAGATA TTCAGATTGC CTTGTCGCTG GCTGCAAAAG CAGAATATGC GGGTGTGACT
TTTAGTGCCA GAGGCGGCGG AACGGGCACC AACGGCCAAT CGCTGACCCA TGGCTTGATC
CTCGATGTGT CTCGCTACAT GAATCGCGTA TTAGAAGTGA ACCCCGAGCA GGGCTGGGTA
CGCGTCGAGG CGGGTGTGGT CAAAGATGCG CTAAACGATG CGCTGCGTCC CCACGGTTAT
TTCTTCAGTC CCGATCTCTC TACCTCTAAC CGTGCCACTA TCGGCGGCAT GATTAATACC
GATGCCTCGG GCGCGGGATC CTTAGTTTAC GGTAAAACCT CTGATCACGT GCTGGCGCTG
CGCAGCGTAT TGATTGATGG CAGCGTATTC GACACTCGTC CCCTCGATGC GGGTCTGTTA
TGTAACCCCG ATAACGTGAG CGATAATCCG CTCGGGCAAA AACTGATTTC GGCGATTGCC
GAAGTGTGCC GCGAGAAGCG TGCGCTGATC GAACAACAAT TTCCTAAGCT CAATCGTTTT
TTAACCGGAT ATGACTTAAA GAATGTCTGG AACAACGGTT TAACCCAGTT CGATCTCTCG
CGCATTTTAA CGGGCTCTGA AGGCACGTTG GCGGTGATCA CCGAAGCGAA ACTCAACATT
ACGCCACTGC CGAGTGAGCG GGCGATGGTG AACATTAAGT ACGACTCCTT TCAGTCTGCA
TTGCGCCATG CGCCATCCTT AGTGACGGCG CGTGCCACTG TGGTCGAAAC CGTGGACTCA
AAAGTGCTTA ACCTTGCCCG TGAGGACATT GTTTGGCATT CGGTTTCAGA TCTTATTCAA
GAAGTGCCGG GTAAAGTGAT CGATGGCCTC AATATGGTGG AGTTTGCTGG CGATGCAGTA
GAGGTGAGTG AAAAGCTTGC GGCACTCGAA GTCGTGCTGA CCGAGCAAAT CAGCCGTGGT
GAGTGTGGTG TGGTCGGTTA TCAAGTCACT CAAGATAAGG CCAGTATAGA GAAAATCTAC
GGCATGCGTA AAAAGGCCGT GGGTCTACTC GGTGCCACCA AGGGACGTCG TAAACCCATT
GCATTTGCCG AAGATACTGC AGTGCCGCCC GAAAAGCTTG CCGATTATAT TATGGAGTTT
CGCGCACTAC TCGATAGTCA CAATTTGCAA TATGGCATGT TTGGACATGT GGATGCGGGC
GTGTTACACG TTAGGCCAGC GCTCGATATG TGCGATGTGG AAGATGAAAA ACTGCTGAGG
GTGATTTCTG ATCAAGTCGC GGCGCTGACA CTCAAATATG GCGGCCTGAT GTGGGGTGAG
CACGGTAAGG GCGTGCGCGG TGAATATGGT CCATCGGTGT TTGGGGATGA GCTTTACGGT
GTACTGCAAG ATATTAAAGG CCTATTTGAC CCTGATAATC GACTCAACCC AGGCAAATTA
GTGGCACCAA AGCAAGCGGG TGGCCTGTGT TTTGATGTTG ACAGTACCAA GCGCGGCAAG
TTTGACCGGC AAATTCCCGT CGAAGTGCGC GATGCCTATC CCGATGTGAT GAACTGTAAC
GGTAACGGCC TGTGCTTTAA CTACAGCAGT TTCTCACCTA TGTGTCCGTC ATTTAAAGTG
ACGGGAGACA GAGTTCAGTC ACCTAAAGGG CGCGCGGGTT TGATGCGTGA GTGGCTGCGT
TTGCTTGAAT CCGAAGGCGT CGATGTGAAC GCGCTGGCGA AAGCTAAACC CTTAGGTATT
TTGCAGCGCA TGCAAAATAC CATCAATGCG AAGCGCGATT ACGATTATTC CCACGAAGTG
ATGGAATCGC TGAAGGGATG TTTGGCCTGT AAAGCTTGCT CGAGCCAATG TCCGGTAAAA
GTGGATGTGC CTAAATTTAG GGCGCAGTTC TTTAATATTT ACTATCAACG TTATCTGCGT
CCGGCTAAAG ATTATCTGGT GGCGGGTATC GAAGACAGCT TACCTCTGAT GGCGGCGGCG
CCAAGGCTGA CCAATTTCGC CTCGCAAAAC CCGCTCAGCC AATGGGTGAT CAAAAAAGCC
ATTGGTTATG TGGATGCGCC AGCGCTGTCA GTGCCGACAT TAAAACAACG ACTCGATGGT
CATGCGAGTC GCGGTTATGA TCTGGCGGCA TTGCAGGCTA TCCCCGCCGA TGAGCGCGCA
AAATTTGTGT TAGTGGTGCA AGATCCGTTT AACAGTTTCT ACGATGCTGG CTTGGTGTAT
CGCTTTATCC AACTGATTGA AACGTTAGGA TTAAAGCCTG TTCTTCTGCC TTTTAAACCC
AATGGTAAAC CGACCCATAT TAAGGGTTTC TTGGATAAAT TTGCTAAAAC GGCGCAGTCG
AGTGCAGATT TCTTAAACCA AGTGCATAAG TTAGGCATGC CTATGGTGGG CATCGATCCC
GCCTTAGTGC TCTGTTATCG CGATGAATAT AAAGAAATCT TAGGGGCGAA TCGCGGCGCG
TTTGAGGTGA AACTGGCTAA CGAATGGCTC CTTAGCATTC TGCAGGATAT TCCGACTAAG
GCTATGCAAG ATAAACAATT TACTTGGTTT AGCCATTGTA CTGAGTCTAC GGCTAAACCT
AATACCGCCA ATGAGTGGAG CAAAATCTTC ACTCACTTTG GCGCTAAATT AACCGCGGTG
AATCTGGGCT GTTGCGGCAT GGCGGGTACT TACGGCCATG AGGCTGAGAA TCTTGAGCGT
TCTAAGACCT TGTTCGATAT GTCGTGGAAA GACACTTTAA GCAAGATAGA CGCATCGCAG
GTGTTAGTTT CGGGCTACTC TTGCCGCAGC CAAGTGAAGC GCTTTGCCGG TTACAAGCCA
AAACATCCAT TAGAAGCTTT GCTCGAACTC GCGAAGGCTT AA
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| Protein sequence | MLPLLSHQQT LEPVYLAYLD ALAQSGYAGD IDKRYSARLV QATDNSVYQF LPQAVLYPKH
QKDIQIALSL AAKAEYAGVT FSARGGGTGT NGQSLTHGLI LDVSRYMNRV LEVNPEQGWV
RVEAGVVKDA LNDALRPHGY FFSPDLSTSN RATIGGMINT DASGAGSLVY GKTSDHVLAL
RSVLIDGSVF DTRPLDAGLL CNPDNVSDNP LGQKLISAIA EVCREKRALI EQQFPKLNRF
LTGYDLKNVW NNGLTQFDLS RILTGSEGTL AVITEAKLNI TPLPSERAMV NIKYDSFQSA
LRHAPSLVTA RATVVETVDS KVLNLAREDI VWHSVSDLIQ EVPGKVIDGL NMVEFAGDAV
EVSEKLAALE VVLTEQISRG ECGVVGYQVT QDKASIEKIY GMRKKAVGLL GATKGRRKPI
AFAEDTAVPP EKLADYIMEF RALLDSHNLQ YGMFGHVDAG VLHVRPALDM CDVEDEKLLR
VISDQVAALT LKYGGLMWGE HGKGVRGEYG PSVFGDELYG VLQDIKGLFD PDNRLNPGKL
VAPKQAGGLC FDVDSTKRGK FDRQIPVEVR DAYPDVMNCN GNGLCFNYSS FSPMCPSFKV
TGDRVQSPKG RAGLMREWLR LLESEGVDVN ALAKAKPLGI LQRMQNTINA KRDYDYSHEV
MESLKGCLAC KACSSQCPVK VDVPKFRAQF FNIYYQRYLR PAKDYLVAGI EDSLPLMAAA
PRLTNFASQN PLSQWVIKKA IGYVDAPALS VPTLKQRLDG HASRGYDLAA LQAIPADERA
KFVLVVQDPF NSFYDAGLVY RFIQLIETLG LKPVLLPFKP NGKPTHIKGF LDKFAKTAQS
SADFLNQVHK LGMPMVGIDP ALVLCYRDEY KEILGANRGA FEVKLANEWL LSILQDIPTK
AMQDKQFTWF SHCTESTAKP NTANEWSKIF THFGAKLTAV NLGCCGMAGT YGHEAENLER
SKTLFDMSWK DTLSKIDASQ VLVSGYSCRS QVKRFAGYKP KHPLEALLEL AKA
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