| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1590 |
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| Symbol | |
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| ID | 4252167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1879612 |
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| End bp | 1880676 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118203 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_733724 |
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| Protein GI | 113969931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00086934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.179227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTA AAACAGACGA ATTACGCACT TCCTTATTAG CTAAAGTCAT CTCACCTGCA
CAACTGGCAT CTGAGTACCC GTTAACCCAA GATGCAGCCG ATTATCTCGT ACAACAACGT
CGTGAAGTCG AAGCCATTAT TATGGGCGAA GATCAACGCC TATTAGTGAT CATTGGCCCC
TGCTCAATCC ATGATACTCA AGCCGCCCTC GACTACGCTC GCCGTTTAGC GGTATTGCAC
CAAGAGTTAA AAGACGATCT CTGCATTTTA ATGCGTGTGT ATTTTGAAAA ACCCCGCACT
ATCGTCGGTT GGAAAGGGTT AATCTCCGAT CCTGATTTAG ATGGCAGCTT CGAGCCAAAT
AAAGGATTAC GTATTGCCCG TGAGTTACTG CAGCAAATTA CTGAACTGAA GTTACCGATT
GCCACCGAAT TTTTAGACAT GGTGAATGGT CAATATATTG CCGATTTAAT CACCTGGGGC
GCTATCGGTG CCCGCACCAC CGAAAGCCAA GTTCACCGCG AAATGGCCTC GGCGCTCTCC
TGCCCCGTTG GCTTTAAAAA CGGTACCGAT GGCAATATTA ATATCGCCGT CGATGCGGTG
CGCGCAGCAA AAGTGCCACA TATCTTCTAT TCACCGGATA AAGATGGCGC CATGTCGGTG
TATCGCACCC ATGGTAATCC TTACGGGCAT ATCATTTTAC GTGGCGGCAA AAAACCGAAT
TACTTTGAGC AAGATATTGA AGAAGCAAGA TTAAAGCTTG AGTCGGTCAA TGTGACGCCG
CGCGTGGTAG TCGATTTTAG CCACGGCAAC AGTGAAAAGA ACCACCTGAA GCAGCTTGTG
GTTGCCGATA ATATCATGGC GCAAATGCGC GCGGGCAGCA CGGCGATTGC CGGGGTGATG
GCAGAAAGTT TCTTACAGGA AGGCAATCAA AAAGTGGTTG AGGGTCAACC TCTGTGTTAC
GGCCAAAGCA TCACAGATGC TTGCCTGCAT TGGGATGACT CGGAGAAATT ACTGCGCGAT
CTGGCTAAAG CCTCCCGTGA TAGACGTGAG TTCCTCGGCA AATAA
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| Protein sequence | MTIKTDELRT SLLAKVISPA QLASEYPLTQ DAADYLVQQR REVEAIIMGE DQRLLVIIGP
CSIHDTQAAL DYARRLAVLH QELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFEPN
KGLRIARELL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ VHREMASALS
CPVGFKNGTD GNINIAVDAV RAAKVPHIFY SPDKDGAMSV YRTHGNPYGH IILRGGKKPN
YFEQDIEEAR LKLESVNVTP RVVVDFSHGN SEKNHLKQLV VADNIMAQMR AGSTAIAGVM
AESFLQEGNQ KVVEGQPLCY GQSITDACLH WDDSEKLLRD LAKASRDRRE FLGK
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