| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1579 |
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| Symbol | |
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| ID | 4252156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1863583 |
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| End bp | 1864932 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118192 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_733713 |
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| Protein GI | 113969920 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.15351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA GACTCAAATT TAAGAAACGT CTGCTGACAC GGATGTTTCT CACCTCGTTA
TCTATCATTA CCTTAGTGGG ATTTGGCCTC GCTTGGATGG TCAATATTCT GCATGCGCAA
AATAGCTACA ACGAGGAAAC CGCACAACTT ATCGCCGAGA TCCCCCAGGT AGCCGCCGAG
CTGAGGGAGC ACGACTTGAT TCCCGACACC AGCGCTTGGC TGGAGGAAAA CAACAAGCAA
GAACGCTATG TGATGGCGAG CTGCGATGAA AAATTTAAAC AGGTATGGAC ATCTTCCCTC
GCCGTCGACC GGGGCCTGTT CGATACCTGC GAACGTTTTA ATGAGATCCG TAACGACTCC
CCGCCCTATT ACCTGACGAT GGCCGATGAC CGAGGCTATT TTGTGTATTT GCTCGCGGTC
GAAATCGCAG GTGTTCACTA CAACCTGCTG GTGATGAAAG ATGCGGCTAA GCTTGAGCAG
GAATACAGTA AATTTAGTAA GCGTACCTAT ATCCGTTTAG CCATGGTGCT CGCCCTCGCG
CTTATTCTGC TGGTCAGTGC GGCATATTGG GGGATGCGTC CACTGGTGCG GATGCAAAAC
GAGCTGCAAT CGATTAACCA AGGTAAGACC AAATCACTTT CAGAGGGCTA TCCCATTGAG
CTTGAAGGTG TCACTCAAGC CCTTAACCAA TTATTACAAC AATCGAGCGC CCAGCAACAA
CGCTATCAAA ATGCGATGAA CGATCTGGCC CACAGCCTAA AAACGCGCCT TGCCGCCGTC
CATGCCATTA CCGATGACAC TAGCCTGACT AAGCAATCTG CCAATGAAAA AATCATGGAG
CAGATAAGCC AAATGGATCA ACTGGTAAAA TATCAACTTA AGCGTGCCAT GCTGGGCCGA
CAAGGCCTAA AACAAGAACA CACCGCCATC GCACCGCTAG TCGATCAACT CGCACAAATG
CTATTCAAGA TTTACCGCGA AAAGCAGGTG CAATTTAAGG CCAACATACC CACAAACCTC
AATTTCCCTG GGAATAAGGG CGACTTGATG GAGCTATGTG GTAACTTAAT GGAAAACGCC
TTCAGGCTGT GCATAAGCCA AGTTGAGGTC AGTGCCCGCT TTAATGATCA AGGTGATTTT
GAATTGATTG TCGAAGACGA TGGGCCGGGG GTTGAAGAAA ACCTGCGGCA AAAAATCATT
CAGCGCGGCG TTAGAGCCGA CACCCAATCC CCAGGACAAG GAATTGGGCT CGCCGTGTGT
GATGAAATTG TCAGCAGTTA CGGTGGCTAT CTGAGCATTG AGGAAAGCCA TTTAGAAGGC
GCAAGATTTA GAATTACTAT CCCTGCCTAG
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| Protein sequence | MQLRLKFKKR LLTRMFLTSL SIITLVGFGL AWMVNILHAQ NSYNEETAQL IAEIPQVAAE
LREHDLIPDT SAWLEENNKQ ERYVMASCDE KFKQVWTSSL AVDRGLFDTC ERFNEIRNDS
PPYYLTMADD RGYFVYLLAV EIAGVHYNLL VMKDAAKLEQ EYSKFSKRTY IRLAMVLALA
LILLVSAAYW GMRPLVRMQN ELQSINQGKT KSLSEGYPIE LEGVTQALNQ LLQQSSAQQQ
RYQNAMNDLA HSLKTRLAAV HAITDDTSLT KQSANEKIME QISQMDQLVK YQLKRAMLGR
QGLKQEHTAI APLVDQLAQM LFKIYREKQV QFKANIPTNL NFPGNKGDLM ELCGNLMENA
FRLCISQVEV SARFNDQGDF ELIVEDDGPG VEENLRQKII QRGVRADTQS PGQGIGLAVC
DEIVSSYGGY LSIEESHLEG ARFRITIPA
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