| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1576 |
|---|
| Symbol | |
|---|
| ID | 4252153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1860348 |
|---|
| End bp | 1861058 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638118189 |
|---|
| Product | DNA replication initiation factor |
|---|
| Protein accession | YP_733710 |
|---|
| Protein GI | 113969917 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.840172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.181958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCATTAA ACTCACCGCT ACAACTGTCG TTACCGGTTT ACTTACCGGA TGATGAAACC
TTTAACAGTT ATTATCCGGC AGCGGGTAAT GACGAACTTA TCCAAAAGCT GCGCGCCAAT
GCCGAAGGTC AGGGTGAAGC CGCTATTTAT GTGTGGGGAC CAGTGAAATC GGGGCGGACT
CACTTAATGC ACGCCGCCTG TGCCCATGCC AATGAACTCG ACCGCCGCAG CTTTTACCTT
CCCCTTGGCA TTCATGCGAG TATCTCGACA GCGCTGTTGG AGGGCTTGGA GCAGCTCGAT
TTGATCTGCA TCGACGATGT AGATGACATT GCGGGTCACC CGATTTGGGA AGAAGCCATA
TTCGATTTGT ACAACCGTGT CGCCGAGAAC AAGCGCTGTG CGCTGGTGGT CAGCGGCCGC
TCGGCGCCCG CGGATGCTGG CTTCTTGTTA CCTGATTTAG TCTCTCGGAT GCAGTGGGGA
CTCAATTATC AGCTGCAACC TATGGCCGAT GATGAAAAGC TAGCGGCACT GCAACGCCGC
GCGGCGATGC GCGGATTACA GTTGCCAGAA GACGTTGGCC GTTTCTTGCT TAACCGCATG
GCAAGGGATC TACGTACCTT GTTTGATGTG TTGGATAAAC TGGATAAGGC ATCCCTCGTA
CATCAGCGCA AGCTCACGAT TCCTTTTGCC AAAGAAATGC TGCATCTGTA A
|
|---|
| Protein sequence | MPLNSPLQLS LPVYLPDDET FNSYYPAAGN DELIQKLRAN AEGQGEAAIY VWGPVKSGRT
HLMHAACAHA NELDRRSFYL PLGIHASIST ALLEGLEQLD LICIDDVDDI AGHPIWEEAI
FDLYNRVAEN KRCALVVSGR SAPADAGFLL PDLVSRMQWG LNYQLQPMAD DEKLAALQRR
AAMRGLQLPE DVGRFLLNRM ARDLRTLFDV LDKLDKASLV HQRKLTIPFA KEMLHL
|
|---|
| |