Gene Shewmr4_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1573 
Symbol 
ID4252150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1857270 
End bp1857602 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID638118186 
Productglutaredoxin-like protein 
Protein accessionYP_733707 
Protein GI113969914 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000259728 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0657649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAG TAGAGAAAAT TAAACAGCAA ATCGCTGAAA ACCCAATCAT CGTTTACATG 
AAGGGTTCTC CTAAATTACC AAGCTGTGGT TTTTCATCTC AGGTAGCACA AATCATGATC
AACTGCGGCG AGCAGTTTGC ATTTGTGGAT ATTCTCCAGC ACCCAGATAT CCGTGCTGAA
TTACCTAAGT ATGCAAACTG GCCAACTTTC CCACAATTGT GGATTGAAGG TGAGCTGATT
GGTGGTTGTG ATATCGTGGT TGATATGTAC CAAAAAGGCG AATTACAGCC GTTAATCAAA
GCGACTGCTG ATAAATACAA AACCGCAGAG TAA
 
Protein sequence
METVEKIKQQ IAENPIIVYM KGSPKLPSCG FSSQVAQIMI NCGEQFAFVD ILQHPDIRAE 
LPKYANWPTF PQLWIEGELI GGCDIVVDMY QKGELQPLIK ATADKYKTAE