| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1567 |
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| Symbol | nhaB |
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| ID | 4252145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1848696 |
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| End bp | 1850297 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118181 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_733702 |
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| Protein GI | 113969909 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000581979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.983866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA CAATGAGTCA GGCGTTTATT GGGAACTTCT TAGGGAATTC TCCTAAGTGG
TACAAGATCG CAATACTGTC GTTTTTAATA ATCAATCCAA TACTCTTTTT CTATGTCAGC
CCCTTTGTGG CTGGTTGGGT ATTAGTGCTT GAATTTATTT TTACCTTGGC AATGGCACTT
AAATGCTATC CATTACAACC CGGTGGTTTA TTAGCGATTC AAGCGGTCGC CATCGGTATG
ACCTCTGCGA GCCAAGTGCT GCACGAAATT GAAGCCAACC TTGAAGTATT ATTACTGCTG
GTGTTTATGG TGGCTGGCAT TTACTTCATG AAGCAGCTAC TGCTATTCGC GTTTACTAAG
ATGATCACTA AAGTACGCTC GAAAATCTTA GTGTCTTTGA TGTTCTGTCT GGCTTCAGCC
TTCTTATCCG CCTTCCTAGA TGCATTAACC GTTATCGCCG TGATTATTAC TGTGGCGGTC
GGATTTTACT CTATTTATCA CAAAGTGGCT TCGGGTAAAG ATTTCTCTGC AGATCATGAC
CATACCTCTG AAGGCAAAAA TGAAGATGGT GAAAACCAGC TCAACGAAGA AGAATTAGAG
TCCTTCCGTG GTTTCCTACG TAACCTATTG ATGCACGCCG GTGTCGGTAC CGCATTAGGT
GGTGTATGTA CTATGGTGGG AGAACCACAA AACTTAATTA TCGCTGCGCA GGCTAATTGG
CAATTTGGTG AGTTCGCGAT CCGTATGTCT CCCGTAACCG TGCCAGTGTT GTTTGCTGGT
ATCCTAACTT GCTTTTTAGT CGAAAAATTA CGTTGGTTCG GTTATGGTGC CCAGCTACCG
GAAGCCGTGC ATAAAATCCT TTGTGATTAC GCCGCCTATG AAGACGCGCG TCGTACCAAT
AAAGATAAGA TGAAGCTGGT TATCCAAGCC TTTGTTGGCG TTTGGTTAAT TGCAGGTCTT
GCGCTGCACT TAGCGTCAGT GGGCTTGATT GGTCTGTCTG TGATCATTTT AACCACAGCC
TTTAACGGTA TTACCGATGA GCATGCACTG GGTAAAGCGT TTGAAGAAGC CCTGCCCTTT
ACGGCGTTGT TAGCGGTGTT CTTTGCGGTT GTGGCCGTGA TTATCGACCA ACAACTGTTT
GGCCCAGTGA TCCAATGGGC ACTAAACCAT GAAGGTAATA CCCAATTAGT GATCTTCTAT
ATCGCTAACG GGTTACTCTC TATGGTCAGT GATAACGTGT TTGTCGGCAC TGTCTATATT
AACGAAGTCA AAGCCGCCCT GATTAACGGT CAAATTACCC GCGATCAATT CGACCTTTTA
GCGGTTGCGA TTAACACTGG TACTAACTTG CCTTCGGTGG CGACACCAAA CGGTCAAGCA
GCATTCCTGT TCTTACTGAC CTCCGCCCTT GCACCGCTTA TCCGTTTATC CTACGGCAGA
ATGGTGTGGA TGGCACTACC CTACACTATC GTGTTATCGA TTGTCGGTGT AATGGCTATC
GAATCAGGCT TCTTAGAGCA GATGACGCAA TACTTCTATG ATTCCCATGC AATCATTCAC
CACAGTGTTA AAGAAGCGTT AGCACCTGCG GCAGCTCACT AA
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| Protein sequence | MPMTMSQAFI GNFLGNSPKW YKIAILSFLI INPILFFYVS PFVAGWVLVL EFIFTLAMAL
KCYPLQPGGL LAIQAVAIGM TSASQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFAFTK
MITKVRSKIL VSLMFCLASA FLSAFLDALT VIAVIITVAV GFYSIYHKVA SGKDFSADHD
HTSEGKNEDG ENQLNEEELE SFRGFLRNLL MHAGVGTALG GVCTMVGEPQ NLIIAAQANW
QFGEFAIRMS PVTVPVLFAG ILTCFLVEKL RWFGYGAQLP EAVHKILCDY AAYEDARRTN
KDKMKLVIQA FVGVWLIAGL ALHLASVGLI GLSVIILTTA FNGITDEHAL GKAFEEALPF
TALLAVFFAV VAVIIDQQLF GPVIQWALNH EGNTQLVIFY IANGLLSMVS DNVFVGTVYI
NEVKAALING QITRDQFDLL AVAINTGTNL PSVATPNGQA AFLFLLTSAL APLIRLSYGR
MVWMALPYTI VLSIVGVMAI ESGFLEQMTQ YFYDSHAIIH HSVKEALAPA AAH
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