Gene Shewmr4_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1564 
Symbol 
ID4252142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1844295 
End bp1845260 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID638118178 
Producthypothetical protein 
Protein accessionYP_733699 
Protein GI113969906 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAAC ATCAAAGTGT CGGTCGCTGC ACCACATTAT TGCTAGGCGC CATTATCGCC 
AGTTTGAGCC TTGCTGGTTG CGGTAAAGTC AGCGAAGAGG TGCAAACGCC TGCGCAGAGC
GCTGTATCTA CTGACACTAA GGCGATTATT GGTCAATCAG AGAAGATGCG CTTATTGGCT
GCACAACTGG ATTTTCAGGC AAGAATTGAT ACGGGCGCGG CGAACACCTC ATTACATGCT
ATCGATCTGC AAGTTGAAGG CGGTGCGTCC GACAAGATGC AGGATAACAT TGGTAAGACA
TTGCATTTTA CCACCGAAAA CGAGGCGGGC GAGCAGCGGC GCTTAGCGGC GAAAATCCTA
AAGACCACCA CAGTGAATAA CGCTCAAGGC AGTGAAGTCC GCTATTTGGT TGAGTTAGAC
ATTGGTTTTG AGGGGCAACA CCGTCTGGTT GCCGTTAACC TACGTGACCG AAGCCATATG
GATTACAAGT TACTGATCGG CCGTAATTGG TTAGCGGGCC GTTATGTTGT CGATGTGGCC
GAGAAACGTC TGATTGGCCC GACAGCGTTT ATCAAAGTGA AAGAAGCCGG GCTGACCTTT
AAAACGCGCA TCGATACGGG GGCGGTTGAA AATTCCCTGC ATGCGATTGA TCTCAAGATT
GACGATGAAG ATCCTACCAA TATGGATAAC AACATCGGCA AGTGGCTTAA TTTCACTACC
GAAAATGAGC GTGGTGAGGA AAAGCGGTTA AGGGCACGGA TTGTCGATAC TTCGCTTATC
CGTAACGCGC AGGGGAGTGA AGTGCGTTAT ATGGTCGAAT TGACCTTAGG TGAGCCTGGG
CGGGAGTATC CCGTTAAAGT AAACCTTAAG GACCGTAGTC AAATGTCCAA TAAACTCTTA
ATCGGCCGTA ACTGGTTACA GGGTCATTAT TTGGTGGATG TAACACTCGA TAAGACGAGC
GACTAA
 
Protein sequence
MLQHQSVGRC TTLLLGAIIA SLSLAGCGKV SEEVQTPAQS AVSTDTKAII GQSEKMRLLA 
AQLDFQARID TGAANTSLHA IDLQVEGGAS DKMQDNIGKT LHFTTENEAG EQRRLAAKIL
KTTTVNNAQG SEVRYLVELD IGFEGQHRLV AVNLRDRSHM DYKLLIGRNW LAGRYVVDVA
EKRLIGPTAF IKVKEAGLTF KTRIDTGAVE NSLHAIDLKI DDEDPTNMDN NIGKWLNFTT
ENERGEEKRL RARIVDTSLI RNAQGSEVRY MVELTLGEPG REYPVKVNLK DRSQMSNKLL
IGRNWLQGHY LVDVTLDKTS D