| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1557 |
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| Symbol | |
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| ID | 4252135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1837558 |
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| End bp | 1839471 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118171 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_733692 |
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| Protein GI | 113969899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT GGTCTATTGA TGCTGCTCGT GCTGGGTACA ACGTTACCCA CTGGAGCCAA
GGGTTTTATG GGATCAGCGA CCAAGGTGAG GTGACAGTGT CGCCGGATCC TAAGAATCCT
GATCACAAGA TTGGCTTAAA TGAGCTAGCA AAAGACATGG TTAAAGCGGG GGTCGCTTTA
CCTGTATTAG TTCGTTTCCC GCAAATTCTG CACCACAGAG TGAACAGTTT GTGCCAAGCA
TTCGACCAAG CGATACAAAA ATATGAGTAT CAGGCGGACT ATTTGCTGGT TTACCCCATT
AAAGTAAACC AACAAAAAAC TGTGGTAGAA GAGATCCTTG CGAGCCAAGC ATCAAAAGAA
GTTCCACAAT TAGGCCTAGA AGCCGGCAGT AAGCCAGAAT TAATGGCCGT ACTGGCCATG
GCGCAAAAAG CCAGTTCAGT GATTGTATGT AACGGTTATA AAGATAACGA ATACATCCGT
TTAGCCTTAA TTGGTGAAAA GTTAGGCCAT AAGGTCTACA TCGTTTTAGA AAAACTGTCT
GAGCTGAAGA TGGTGTTGGC CGAATCTAAG CGCTTAGGGG TGAAACCTCG CTTAGGTCTA
CGTGCGCGCC TTGCATTCCA AGGTAAAGGC AAGTGGCAAG CCAGCGGTGG CGAAAAGTCT
AAGTTCGGTT TATCTGCGGC GCAGATTTTA ACTGTGGTAG ATCAGTTAAA AGAAAACGAC
ATGTTGGATT CGCTGCAGTT ATTGCACTTC CACTTAGGTT CGCAAATCGC GAACATCCGC
GATATTCGTC AGGGTGTGAG TGAAGCGGCG CGTTTCTACT GTGAATTACG CGAGTTAGGC
GCCAGCATCA ACTGCTTCGA CGTCGGCGGT GGTTTAGCGG TGGATTACGA CGGCACACGT
AGCCAAAGTA ACAACTCAAT GAACTATGGC TTAAGCGAAT ACGCCAATAA CATCGTTAAC
GTGCTTACCG ATATCTGTAA TGAATACGAG CAACCTATGC CACGTATTAT TTCAGAATCA
GGCCGTCACT TAACGGCGCA CCATGCAGTG CTGATCACCG ACGTGATTGG TACTGAAGCC
TATCAGGTAG AAGATATCCA GCCGCCAGCG GAAGAATCGC CACAACTGCT GCACAACATG
TGGCAATCGT GGACTGAGTT GAGCGGCCGC GCTGATCAAC GTGCACTGAT TGAGATTTAC
CACGATAGCC AAAGCGACTT GCAAGAAGCG CAATCACTGT TTGCCTTGGG TCAATTAAGC
TTGGCGGAGC GTGCGTGGGC TGAACAGGCA AACCTGCGTG TTTGTCACGA AGTGCAAGGT
TTGTTAAGCA CCAAAAACCG TTACCACAGA CCGATCATCG ATGAGTTAAA CGAAAAGTTA
GCCGATAAGT TCTTCGTTAA CTTCTCACTA TTCCAATCGT TACCGGATGC TTGGGGTATC
GATCAGGTGT TCCCTGTACT GCCGCTGTCA GGTTTAGACA AAGCGCCAGA GCGCCGCGCT
GTTATGTTGG ACATTACCTG TGACTCTGAC GGTATTGTTG ACCAATACGT AGACGGTCAA
GGGATTGAAA CCACGCTGCC AGTTCCGGCT TGGAGCGCAG AGAGCCCTTA CTTGATGGGC
TTCTTTATGG TGGGCGCATA TCAGGAAATT TTAGGCGATA TGCACAACCT GTTTGGTGAT
ACTAACTCTG CGGTGGTCAG CATCGAAGAA AACGGTATGA CTAATATTGA GTCGGTACTT
GCCGGTGACA CAGTCGCTGA CGTACTTCGT TATGTTAACT TAGATGCGGT CGACTTTATG
CGCACCTACG AAGAGTTAGT GAACCAGCAT ATTGTTGAAG AAGAACGCGC GCAAATTTTA
GAAGAATTAC AAGTGGGCCT AAAAGGTTAC ACTTATTTAG AAGATTTTTC TTAA
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| Protein sequence | MNDWSIDAAR AGYNVTHWSQ GFYGISDQGE VTVSPDPKNP DHKIGLNELA KDMVKAGVAL
PVLVRFPQIL HHRVNSLCQA FDQAIQKYEY QADYLLVYPI KVNQQKTVVE EILASQASKE
VPQLGLEAGS KPELMAVLAM AQKASSVIVC NGYKDNEYIR LALIGEKLGH KVYIVLEKLS
ELKMVLAESK RLGVKPRLGL RARLAFQGKG KWQASGGEKS KFGLSAAQIL TVVDQLKEND
MLDSLQLLHF HLGSQIANIR DIRQGVSEAA RFYCELRELG ASINCFDVGG GLAVDYDGTR
SQSNNSMNYG LSEYANNIVN VLTDICNEYE QPMPRIISES GRHLTAHHAV LITDVIGTEA
YQVEDIQPPA EESPQLLHNM WQSWTELSGR ADQRALIEIY HDSQSDLQEA QSLFALGQLS
LAERAWAEQA NLRVCHEVQG LLSTKNRYHR PIIDELNEKL ADKFFVNFSL FQSLPDAWGI
DQVFPVLPLS GLDKAPERRA VMLDITCDSD GIVDQYVDGQ GIETTLPVPA WSAESPYLMG
FFMVGAYQEI LGDMHNLFGD TNSAVVSIEE NGMTNIESVL AGDTVADVLR YVNLDAVDFM
RTYEELVNQH IVEEERAQIL EELQVGLKGY TYLEDFS
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