Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1554 |
Symbol | |
ID | 4252132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1834792 |
End bp | 1835460 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118168 |
Product | hypothetical protein |
Protein accession | YP_733689 |
Protein GI | 113969896 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGTTGTC TACTTGAAAA AGAAGTCACC ACCCCAGAGC AATACCCTCT TTCACTCAAT GCCCTGACCC TCGCCTGTAA TCAAAAAACC AGCCGCGATC CCGTACTGGA CTTAAGCGAA GCGCTGGTTC AAGACGCCCT GGATTCATTG AATAAAAAGC GACTAATCAG CGAGCAATCC GGCTTTGGTA GCCGAGTCGT CAAATACAAG CACAGATTCT GCAACACCGA ATTTAGCGAG TTACAACTTT CCAGCGCCGC TGTGGCGATT ATCTGTTTGC TGTTGCTTCG CGGCCCACAA ACGCCGGGCG AATTGCGTAC CCGCAGCAAC AGGTTGCATG ACTTTAAAGA TGTGCTTGAG GTTGAAGCCT GCATTAAGCA GCTGATGGAG CGAGATAAAC CCGTGCTAGC GCAGTTACCA CGGGAGCCGG GTAAGCGTGA ATGCCGTTAT GCAGAGCTGT TTTCCCAAGG CGCAGAGCAG ATTAACGCCG CGTCATTATC CGCCGATTCG CCGAGCGCGG GCTCAAACTC ACTTAACGCT CAAGATAGAC AACAACTGGA AGCCAGAGTC ACGCAGCTTG AAGAGCAAGT GGCTGAACTT AAAGATAAGT TAGACTCGCT TATCGCTTCT TTATCCTAA
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Protein sequence | MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SRDPVLDLSE ALVQDALDSL NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSSAAVAI ICLLLLRGPQ TPGELRTRSN RLHDFKDVLE VEACIKQLME RDKPVLAQLP REPGKRECRY AELFSQGAEQ INAASLSADS PSAGSNSLNA QDRQQLEARV TQLEEQVAEL KDKLDSLIAS LS
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