| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1548 |
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| Symbol | uvrC |
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| ID | 4252126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1827991 |
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| End bp | 1829820 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118158 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_733683 |
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| Protein GI | 113969890 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000704584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAG GTTTTAACGC CCAGAGTTTT TTACGCACAG TTTCATCCTC TGCAGGGGTT
TATCGCATGT ATGACGTCAA AGGTGACGTC ATCTATGTGG GTAAAGCTAA AGATCTTAAG
AAGCGCTTAT CCTCCTATTT TCGTAAAAAC CTTGGGAATG TGAAAACCCA GGCGCTGGTG
TCCCATATCC ATCATATCGA TGTGACGCTG ACCCACAGTG AGACCGATGC GCTGCTGCTT
GAAAATGACT ATATCAAGCA GTACATGCCC AAATACAATG TGTTACTGCG GGACGATAAG
TCATACCCTT ATATTTTCTT GAGTCAACAC GAGCATCCAC GCCTTGCATA CCATCGCGGG
CCGCAGCGGG AGAAGGGCTA TTACTTTGGG CCTTATCCCA ATGGCGGCGC GGTGCGCGAA
AGTTTGCACT TGATGCAAAA GCTGTTTCCT ATTCGCCAGT GTGATGATCT CTATTATAAA
TCCCGCACTC GTCCCTGCCT GCAATACCAG TTATCCCGTT GCAGCGCGCC TTGCGTCGGT
AAGGTCAGTA ATGCGGAGTA TGATGAGCAG GTTAAACTCG CCAGTTTGTT CCTAAAGGGA
AAAGATAAGC AAGTTATCAG TGAGCTCGTG GCTAAGATGG AAGAGGCCGC CGAGCAGCAA
GCCTATGAGC AAGCCGCGCG CTTTCGCGAT CAAATTATGG CGCTGCGCCG CGTGGCCGAG
CAGCAAGAAG TCTCGGGCAA TACCGGGGAT ATGGATGTTA TCGGCGTGCA TTACGCCTCG
GGCATCGCTT GTTTTCACCT GTTATTTATC CGCGAAGGTA AAATTTTTGG TAGCCGCAGC
TATTATCCAA CGGTGCCCGC GCAAACGGAT ATTGAAGAAG TCTTACGTTC CTTCCTGCTA
CAGTTTTATT TAAATGCCGA TATTCAACGC ACCATTCCTA AGGAAGTGGT GATAAGCCAT
CACTTTGAAG AATTGCATGA GCTAGAGGCG GCCGTCTCTG AGGCGTTAAA CAAAAAGTTC
AGCATCAAAA CCAATGTGCG CGCCGATAGG GCAAGCTTTT TGCGCCTTGC GCTAACTAAT
GCCACCAATG CGGTGATGAC GCGTCTGTCC CATAAAAACA CCGTTGAACA ACGTTTTGTC
TTGTTGGAGG AGATTCTCGA ACTCAATGCG CCGATCCAGC GCATGGAGTG TTTCGATATC
AGCCATACCA TGGGGGAGAG TACGGTAGCC TCTTGCGTGG TGTTTAACCG CGAGGGGCCA
CATAAGGCCG AATACCGACG TTACAATATC GAAGGCATTA CGCCCGGCGA TGATTATGCC
GCGATGAAAC AAGCCATTAG TCGTCGATTT GATAAAATCG ATGCCAGCGG CAAAATTCCT
GACATCTTAT TTATCGACGG TGGTTTGGGT CAGCTGCGTA TCGCGCAGCA AATAGTGGAT
GAGAAATTCG TCAATTTAGA TAAAGCGCCG CAACTGATTG GGGTGGCAAA GGGAGAGAGC
CGTAAACCTG GGCTTGAAAC CTTAATCTTT GGCGATACTG AAAGTAGCTT TTCCCTTGAA
GATGACTCGC CAGCGCTGCA CCTTATTCAA CATATTCGCG ATGAGTCTCA CCGCTTTGCG
ATTACAGGCC ATCGCAATCG GCGCCAGAAA ACCCGTAACA CCTCGACGCT CGAATCCATT
CCCGGCATTG GTCCTAAGCG GCGCAAGGCG TTATTGCAAC ATCTTGGTGG TTTACAGGAA
GTGAAGGGCG CGAGTGTGGC CGAATTAGCG AAAGTGCCTG GTATTAGCAT AGAAATGGCA
CAAACCATTC ATGATGCATT GCGAGGGTGA
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| Protein sequence | MSTGFNAQSF LRTVSSSAGV YRMYDVKGDV IYVGKAKDLK KRLSSYFRKN LGNVKTQALV
SHIHHIDVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYIFLSQH EHPRLAYHRG
PQREKGYYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRTRPCLQYQ LSRCSAPCVG
KVSNAEYDEQ VKLASLFLKG KDKQVISELV AKMEEAAEQQ AYEQAARFRD QIMALRRVAE
QQEVSGNTGD MDVIGVHYAS GIACFHLLFI REGKIFGSRS YYPTVPAQTD IEEVLRSFLL
QFYLNADIQR TIPKEVVISH HFEELHELEA AVSEALNKKF SIKTNVRADR ASFLRLALTN
ATNAVMTRLS HKNTVEQRFV LLEEILELNA PIQRMECFDI SHTMGESTVA SCVVFNREGP
HKAEYRRYNI EGITPGDDYA AMKQAISRRF DKIDASGKIP DILFIDGGLG QLRIAQQIVD
EKFVNLDKAP QLIGVAKGES RKPGLETLIF GDTESSFSLE DDSPALHLIQ HIRDESHRFA
ITGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELA KVPGISIEMA
QTIHDALRG
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