| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1546 |
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| Symbol | |
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| ID | 4252124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1823885 |
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| End bp | 1825633 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118154 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_733681 |
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| Protein GI | 113969888 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000113225 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAATG CTTATATGAA TTCACTCTTG ATACCATCAT CCTCACTCGC GCCTGAATTT
AACCTTCCTA CCCTGCCGCA ATCGGCCACA GGATTAAAAA CCCTGCTTTT AGGGCAAGAA
CGTGTATTGG ATGCCTTTAA GTTACATAAC GCCATTGCCG ATCAACAGCT GTATCTCGCC
GATTTTCCGG GCATCGACCG ACAATTAATC ATGCAAGCCC TAATGGAAAC GGTCGAGCCG
TTACCCACCG CCTATTTAGT GGCGGCCCAG CCAGTGGGGA AAACCGTACC ATTTCGTTGG
CAATACGAAG CGCCGCTTGA TAACCAAGAC GCGATTGCTG AAAAAAATGT CAGTTACCGT
TACCTGAGTG GCAATATCCG CCGTGCTGAT CTTCTCGGCC GTATGGTGCA ATCGGCAAAT
GGCAGTCAGT ATCAACCCGG TGCCCTCGCC CAGTGCCACT ATGTGTTTAT CTGCGCCGAA
TCTCTGTGGA AACGCGAAAG CCTATGGGAT CTGGTGATGC AAATTCTGAC ACAAAAAGAG
TATCAGATAA GCAGTCACCT AAGCCCTATT CCGTTAAATT GTAAAATCAT TCTTATCGGC
GCAGGCTTAA TCTACAGCCA AGTCCGCTCC GAAGACTGGG AATTTCAGCG TCACTTTAGC
CTGCTGGCAG AGCTGGCGAG TGAACTCGAT CTGACCCGCT TTAAAGAAGT GCAATATGCC
AGTTGGTTAC AAGCCGTGGC TCAGAGCGTT GAGGTTAGCC TAGAACAATC GAGCCTTGCG
CCACTGTTTA GACACAGCGC AAGATTAACC GAGCATCAAC GCCGTTTAAG CCTGTCGATG
CTCGATTTTG CCCAATTAAT GGCTCAGGCT AAGGTGTATA GCGGGAAACC CAGCATCAAT
GCCGCCAGTG TTGAACACGC GCTCGAGCAA GCTAACTATC GCCATAACAG CTCTGAGGAG
TTTTCTGGGC AGAGTTTTGA TGACAATTTC ATAAATCTGC CAACTGAAGG CGCTATGGTA
GGTCAGATTA ATGGCCTAAC GGTTATCGAT GCGATTGACC ATAGTTACGG CGAACCCGCG
CGGATCACCG CAACCGTGCA CTATGGTGAT GGCGAAGTGG CAGACATTGA AAGAAAGTCC
GAGCTAGGTG GCAATATCCA CGCCAAGGGC ATGATGATCC TTTCTGCCTG TTTGTATCGC
ATTTTTGGTC GTGATGCTCC GCTACACCTT AATGCCAACA TCGTATTCGA ACAGTCCTAT
CAAGAGATCG ATGGTGATAG CGCCTCGCTC GCAGAGTATT GTTGTTTGAT GTCGGCGATT
GCCGAACAGC CGATTATTCA GTCGCTCGCG ATTACTGGCG CGTTGGATCA ATTTGGCAAT
GTGCAAGCGA TTGGCGGCAT AAATGAGAAA ATTGAAGGCT TTTTCAATTT GTGTGAACGT
CGTGGTCTCA CGGGTGAACA GGGCGTGATT ATGCCTAAGT CGAACGTTCT GCAGCTTAAC
CTACACCCGA AAGTCATTAC AGCTGTAGGC AAAGGCCAAT TCCATATCTA TGCCATTGAG
CATATGGACG AAGCGGTGGA GCTATTGATG CAGATGCCAG CAGGGGTTGC CAATGAGGAT
AATGACTTCC CTGCAGACTC CTTGTATGGC CTAGTGCAAG AACGGCTCGA TAAGCTCGCG
GGGAACGGCG AGGAAGAAAT TAGTTTTATG ACGAGGTTAC TCGCAAAACT GGGATTATTT
CGCCATTAA
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| Protein sequence | MVNAYMNSLL IPSSSLAPEF NLPTLPQSAT GLKTLLLGQE RVLDAFKLHN AIADQQLYLA
DFPGIDRQLI MQALMETVEP LPTAYLVAAQ PVGKTVPFRW QYEAPLDNQD AIAEKNVSYR
YLSGNIRRAD LLGRMVQSAN GSQYQPGALA QCHYVFICAE SLWKRESLWD LVMQILTQKE
YQISSHLSPI PLNCKIILIG AGLIYSQVRS EDWEFQRHFS LLAELASELD LTRFKEVQYA
SWLQAVAQSV EVSLEQSSLA PLFRHSARLT EHQRRLSLSM LDFAQLMAQA KVYSGKPSIN
AASVEHALEQ ANYRHNSSEE FSGQSFDDNF INLPTEGAMV GQINGLTVID AIDHSYGEPA
RITATVHYGD GEVADIERKS ELGGNIHAKG MMILSACLYR IFGRDAPLHL NANIVFEQSY
QEIDGDSASL AEYCCLMSAI AEQPIIQSLA ITGALDQFGN VQAIGGINEK IEGFFNLCER
RGLTGEQGVI MPKSNVLQLN LHPKVITAVG KGQFHIYAIE HMDEAVELLM QMPAGVANED
NDFPADSLYG LVQERLDKLA GNGEEEISFM TRLLAKLGLF RH
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