Gene Shewmr4_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1537 
Symbol 
ID4252115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1813646 
End bp1814404 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID638118141 
Producthypothetical protein 
Protein accessionYP_733672 
Protein GI113969879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.824913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA GTCTCATTGA AATAACCGTT GCCGAGATTA AAGAACTCGC CGATGTCGAG 
CCAAAACAGG CCAGTAAACG TTTCGAACTC ATCGCCACCA CAATGAACGA TGAGCAATTA
GTCGAAGTCA TTGAAAAAAT GGACATTGTG ACCCTGACGC AAATCAACAG TCACCACGAT
ATCTCCTGCC CGTCAATTAT GTCGGAGCTG ATGACCCCTG AGCAAATTCG CGACATCGTC
TGTCAGCAAC CTTTGTATTG GGAAGAAAAA ATCAAGAACA ATGCCGAAGA ACTCATTCAG
CATACCTTTG ATTTTTTGAC CTATTTAATT CGCATCCAAG ATAGCGAAGA AAAACAAACT
GCTATTTTAG AATGCATTGC CGAAGATCCC GCCGGCCTCT TCTATCTGTC TATCCCCTTT
ATCGAGATGA TGTTGGGTGA GCGCCACGAC GATGAAGACC ACTTCAACGA TTATTATGAC
GATGAAGAAG ATACCGACAC CGTCGGCTAT GACAGCCGTG CCGCCAGTGA AGAAGCCCAT
AGCTTAAGCC TAGATGACCC ACGTAGTCTG ATGGCGTTAA TCCATGAGCT GGCACCCGAT
GTAGAAAAAG CCATTAAAAA CCTGCTGCGT AACGAAAGCT CTGGCTGGGA GATGATCATT
AATAAGTTCG TCAATGAACT GGTTATCCAA GCCAAAGAGA AAAACCAAGT CACGGACGAA
TACGCTGAAG TGGATGATAT GTTTAGCTTT TTAGATTAA
 
Protein sequence
MNTSLIEITV AEIKELADVE PKQASKRFEL IATTMNDEQL VEVIEKMDIV TLTQINSHHD 
ISCPSIMSEL MTPEQIRDIV CQQPLYWEEK IKNNAEELIQ HTFDFLTYLI RIQDSEEKQT
AILECIAEDP AGLFYLSIPF IEMMLGERHD DEDHFNDYYD DEEDTDTVGY DSRAASEEAH
SLSLDDPRSL MALIHELAPD VEKAIKNLLR NESSGWEMII NKFVNELVIQ AKEKNQVTDE
YAEVDDMFSF LD