Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1537 |
Symbol | |
ID | 4252115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1813646 |
End bp | 1814404 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638118141 |
Product | hypothetical protein |
Protein accession | YP_733672 |
Protein GI | 113969879 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.824913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACTA GTCTCATTGA AATAACCGTT GCCGAGATTA AAGAACTCGC CGATGTCGAG CCAAAACAGG CCAGTAAACG TTTCGAACTC ATCGCCACCA CAATGAACGA TGAGCAATTA GTCGAAGTCA TTGAAAAAAT GGACATTGTG ACCCTGACGC AAATCAACAG TCACCACGAT ATCTCCTGCC CGTCAATTAT GTCGGAGCTG ATGACCCCTG AGCAAATTCG CGACATCGTC TGTCAGCAAC CTTTGTATTG GGAAGAAAAA ATCAAGAACA ATGCCGAAGA ACTCATTCAG CATACCTTTG ATTTTTTGAC CTATTTAATT CGCATCCAAG ATAGCGAAGA AAAACAAACT GCTATTTTAG AATGCATTGC CGAAGATCCC GCCGGCCTCT TCTATCTGTC TATCCCCTTT ATCGAGATGA TGTTGGGTGA GCGCCACGAC GATGAAGACC ACTTCAACGA TTATTATGAC GATGAAGAAG ATACCGACAC CGTCGGCTAT GACAGCCGTG CCGCCAGTGA AGAAGCCCAT AGCTTAAGCC TAGATGACCC ACGTAGTCTG ATGGCGTTAA TCCATGAGCT GGCACCCGAT GTAGAAAAAG CCATTAAAAA CCTGCTGCGT AACGAAAGCT CTGGCTGGGA GATGATCATT AATAAGTTCG TCAATGAACT GGTTATCCAA GCCAAAGAGA AAAACCAAGT CACGGACGAA TACGCTGAAG TGGATGATAT GTTTAGCTTT TTAGATTAA
|
Protein sequence | MNTSLIEITV AEIKELADVE PKQASKRFEL IATTMNDEQL VEVIEKMDIV TLTQINSHHD ISCPSIMSEL MTPEQIRDIV CQQPLYWEEK IKNNAEELIQ HTFDFLTYLI RIQDSEEKQT AILECIAEDP AGLFYLSIPF IEMMLGERHD DEDHFNDYYD DEEDTDTVGY DSRAASEEAH SLSLDDPRSL MALIHELAPD VEKAIKNLLR NESSGWEMII NKFVNELVIQ AKEKNQVTDE YAEVDDMFSF LD
|
| |