Gene Shewmr4_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1518 
Symbol 
ID4252096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1785695 
End bp1786690 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content45% 
IMG OID638118117 
Productalcohol dehydrogenase 
Protein accessionYP_733653 
Protein GI113969860 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0829184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0167196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCA ATCAAATTCA TTTAGCATCA CGTCCTACAG GTATGCCAAC ACAAACTAAC 
TTTAAGTTGG TCGAGGTCAC ATTACCCGCC TTGAAAACCG GAGAAGTGTT AGTCAAAAAC
ACTTGGATGT CGGTCGATCC CTATATGCGC GGTCGGATGA TCGACAAGGA TTCCTATATT
CCGCCATACC AAATTAATGA AGTGATGGAT GGTGGCGCCA TTGGTGAAGT CATTGAATCC
TTAAATCCAC AATTTCCCGT TGGTGCCAAG GTGAGCCATA TCAGTGGCTG GCGTAGTGCC
TTTATCAGTG ACGGTAGCGA TCTCACTTTA TTACCTGCAG TGAATATTCC TGAGCAGTAC
TTTTTAGGTA TTATCGGTAT GCCTGGCTTG ACAGCTTGGG TCGGTCTAAT GAAAGTGGCT
AAGTTAAAAC CAACGGATAC AGTATTTGTT TCAGCTGCAT CCGGTGCGGT CGGTATGGTT
GTCTGTCAAA TCGCCAAGCT TAATGGCTGT AAAGTGATTG CTTCAGTTGG CTCAGATGAA
AAAGCCGAGC TCGTCAAAAG TCTCGGTGTG GATGCGGTGA TTAACTATAA AAATGTGACC
GATTTAACCC AAGCACTGCG TGACGCGGCT CCAGAAGGCA TTGATGTGTA TTTTGAGAAC
GTCGGTGGCG CCCATCTTGA AGCTGCTTTA GATGTGATGA ATGATTACGG CCGCATTTCG
GTATGTGGCA TGATTGCCTA TTATAATGCG CAGACGCCAG TTCCTGGTCC AAGCAATCTC
TTAGCGATTA ACACCAAAAA GCTCACCATG CAGGGCTTTA TTGTGATGGA TTATTGGGAC
CAGTACAGCG AGTTTGTGGG ACAGATGGCG CAGTGGTTAC AAGAAGGCAA AATGAAGTCG
GAAGAGACAG TATATCAAGG TTTAGAACAA GCTCCTGATG CATTTATCGG CTTATTCGAA
GGCAAAAATA AAGGAAAGAT GCTGGTTAAA CTCTAA
 
Protein sequence
MISNQIHLAS RPTGMPTQTN FKLVEVTLPA LKTGEVLVKN TWMSVDPYMR GRMIDKDSYI 
PPYQINEVMD GGAIGEVIES LNPQFPVGAK VSHISGWRSA FISDGSDLTL LPAVNIPEQY
FLGIIGMPGL TAWVGLMKVA KLKPTDTVFV SAASGAVGMV VCQIAKLNGC KVIASVGSDE
KAELVKSLGV DAVINYKNVT DLTQALRDAA PEGIDVYFEN VGGAHLEAAL DVMNDYGRIS
VCGMIAYYNA QTPVPGPSNL LAINTKKLTM QGFIVMDYWD QYSEFVGQMA QWLQEGKMKS
EETVYQGLEQ APDAFIGLFE GKNKGKMLVK L