| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1515 |
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| Symbol | |
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| ID | 4252093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1782240 |
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| End bp | 1784102 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118114 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_733650 |
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| Protein GI | 113969857 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0149843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA GCGAATTACA ACCCGTTGTG CAGTTTTTAA CGTCTACGGC TCCCTTCGAT
ACCTTGCCAG ACGACACTAT TCGCCATTGT GCTAAGTCAG TGATCGTCGG TTATTACAGC
AAAGCCTCAG GATTTGTGAA ATTTGATGCC GATGCGCCGA AATTGTATTT GGTTCGCAGC
GGTGCCTTTG AGGTACGCGA TCCCGAAGGG GTCTTAGTAG ACAGGGTCGC CGAAGGGGAG
TTTTTTGGCT TTTCGACCTT ATTGTCAGGG GAGAAGGTCG TGAATCGGGT CGCCATTCTC
GAAGACAGTT TGGTATACCA CTTACCGCAG GCATTGTTCG ATCAACTACG CAGTGAAAGT
CGGCATTTTG ATAAATTTTT CACCCGCGCC TTTGCCAAGC GGTTGCGCCA TGAGGCGCGT
TTTAAGGCCA AAGATCTGAC GACCACCAGT CGTATCAGTA CCTTGATGTC ATCTTCACCC
ATTATGATCG ATGCCCATGC TAGCGTAACG CAAGCGGCGC TCTTGATGCG TAACTCGCGG
GTGTCGTCTT TACTCGTCAC AGATAATCAT AAGCTAGTGG GGATTTTAAC CGACAAGGAT
CTGCGTAATC GGGTGCTTGC TGCCGGACTC GATGGCCGAA TCGCTGTGCA TCAAGCCATG
ACCACATCGC CGATTTCGAT TTCATCGAAT GCCTTGATTT TCGAGGCGAT GTTATTAATG
AGTGAGCATA ACATTCATCA CTTGCCGATC ATTGATGATC AAAATACCGA TGAAGTGAAA
GCCATTGGTA TGGTGACCAG CACCGACATC TTACGCGGCC AAGGTTCGCA GCCCTTGCTG
CTGATTGGTG AAATCGAGCG ACAGCGGGAT CTCGCCAGCT TAATTAGCGT CAGTAAACAA
ATTCCCTTGT TGTTACAAAA TTTAATCAGT GCCGATGCAA GGGCTGAGGA GATTGGTCGC
GTGCTGACCT CGGTCACCGA TGCCTTAACC CGGCGATTGA TTGTATTAAA TCAGCAAATT
CTCGGTGAGG CGCCGATGGC GTTTTGCTGG TTAGCCTTTG GCTCGCAGGG GCGGCAAGAC
CAAGCCGCTT GTTCGGATCA AGATAACGGA CTGCTGGTGG CCGAAGAAAT GGATGATTAT
GCCAAAGGGT ATTTCGATGC CTTGACCCAT GCGGTCTGTG CTGGGCTTGA CCAATGTGGC
TATGCCTTTT GCCCCGGCAA TATCATGGCG CAAAATCCTA AGTGGCGTAT GTCACTCAAA
GCATGGCAAC AGGTCTTTGA AAAGTGGGTG GTTACGCCAG AGCCAAAGGC ATTGATGCAT
GCGAGTATTT TCTTCGATAT GCGTTCGGTG TTTGGCCCGC AATCCTTATT CAATGCTCTG
CAGGATAAAG TGCTGGCACA AACCAAAGAC AATGATATTT TCCTCGCGGG TTTAACTGGC
AATTCCTTAA TCGAGTCTCC GCCCTTAGGA TTTTTTAGAA AATTTGTGTT AGAACGCGAT
GGCAGTGAAG TCAAAGGCAT TGATTTAAAG CATAAAGGTA ATGCCTTGAT CAACGATATC
GCCCGCGTAT ATGCCCTGTC GGCCGGCATA AAGGAAGTCA ATACTGCCAA ACGCATTCGG
GCACTGATGG ACGCGAATAT TCTCAATCGT AAGGATGCGC TTAACTTAGC CGATGCTCAC
GAGTTTATCG CCCATATGCG GTTATCAAAT CAAGGTTACC AACATACGCA GGGGCTTAAG
ATTAGTAACT ATCTGTTACC TGGACATTTA TCTTCTTTGG TACGGCATCA ACTACGGGAT
GCCTTTAAGG TGGTCCATGA TGCCCAGTCG GGCATGAAGA TGAAATTTAT GCGGAGCTTT
TAA
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| Protein sequence | MNASELQPVV QFLTSTAPFD TLPDDTIRHC AKSVIVGYYS KASGFVKFDA DAPKLYLVRS
GAFEVRDPEG VLVDRVAEGE FFGFSTLLSG EKVVNRVAIL EDSLVYHLPQ ALFDQLRSES
RHFDKFFTRA FAKRLRHEAR FKAKDLTTTS RISTLMSSSP IMIDAHASVT QAALLMRNSR
VSSLLVTDNH KLVGILTDKD LRNRVLAAGL DGRIAVHQAM TTSPISISSN ALIFEAMLLM
SEHNIHHLPI IDDQNTDEVK AIGMVTSTDI LRGQGSQPLL LIGEIERQRD LASLISVSKQ
IPLLLQNLIS ADARAEEIGR VLTSVTDALT RRLIVLNQQI LGEAPMAFCW LAFGSQGRQD
QAACSDQDNG LLVAEEMDDY AKGYFDALTH AVCAGLDQCG YAFCPGNIMA QNPKWRMSLK
AWQQVFEKWV VTPEPKALMH ASIFFDMRSV FGPQSLFNAL QDKVLAQTKD NDIFLAGLTG
NSLIESPPLG FFRKFVLERD GSEVKGIDLK HKGNALINDI ARVYALSAGI KEVNTAKRIR
ALMDANILNR KDALNLADAH EFIAHMRLSN QGYQHTQGLK ISNYLLPGHL SSLVRHQLRD
AFKVVHDAQS GMKMKFMRSF
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