| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1511 |
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| Symbol | |
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| ID | 4252089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1778033 |
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| End bp | 1778884 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118110 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_733646 |
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| Protein GI | 113969853 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.286143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00478642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGTTGA GTGTGGTAAA TCAAAAAAGT GTTGCGGTTG TCGGTTGTGG TTGGTTTGGC
TTTGCCCTTG CTAAACACTT AGTACAAGCG GGTTATCGAG TCACTGGTGC TAAACGCCAC
ACGGAGGAGT TAGCACCGCT CACTGAGGCG GGGATCCGTG GATTCCAACT GCAACTCGGG
GATGACGCTG ACGTTCTCCC CGACGCGCAA GCTTTAAAGG ACTTGTTTCA GACAGACTTT
CTTCTCGTCA ATATTCCTCC GCGCCTCAAA CATGGTAATA CCGCTTATCT TCAAGAATTG
CAGCAATTAA TTGCGCTAAC CCAAGGCTGG CATTATCAAG GCATAGTGTT TATCAGTACT
ACGGGTGTTT ATCCCTCCAT TGACAAATCC ATGACCGAAG CGGACGCACA GGCCGAGTCA
CCTTCATCAC AGGTGTTATT GGACGCCGAA GCCTTATTTG CTCGCCAACC GAATAGCTGC
ATCGTACGTT TTGCGGGGTT GGTTGGACCC AAACGTCATC CTGGGCGCTT CTTTGCCGGT
AAAACCGATG TGGCTGGCGG CAATGTTGCG GTTAATCTGG TGCATTTGCA GGACTGCGTT
GCGGCGGTGA GCTTGATTAT TGATGCAAAG GCGAAGGGGG AAAAGGTCGC CGCAATTTAT
AATCTTTGCG CGCCAGAGCA TCCCTCGAGA AGCGAATTTT ATGTGGCCGC CGCCGAGTCC
TTGGGATTAG CGGCGCCACA ATTTAATGGG CAGGTACAAC CCAGCAAAGT CATTCTCGGT
GATGCGATAG TCCGCGAGCT TGGGTTTGAG TATCAGTTTG CTTCCCCTCT TGCGATGTTA
GCGGCCTGTT AA
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| Protein sequence | MELSVVNQKS VAVVGCGWFG FALAKHLVQA GYRVTGAKRH TEELAPLTEA GIRGFQLQLG
DDADVLPDAQ ALKDLFQTDF LLVNIPPRLK HGNTAYLQEL QQLIALTQGW HYQGIVFIST
TGVYPSIDKS MTEADAQAES PSSQVLLDAE ALFARQPNSC IVRFAGLVGP KRHPGRFFAG
KTDVAGGNVA VNLVHLQDCV AAVSLIIDAK AKGEKVAAIY NLCAPEHPSR SEFYVAAAES
LGLAAPQFNG QVQPSKVILG DAIVRELGFE YQFASPLAML AAC
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