Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1502 |
Symbol | |
ID | 4252080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1763823 |
End bp | 1764944 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118101 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_733637 |
Protein GI | 113969844 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.259423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000378391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAGG TCGTTATTTC TGGCAGCGGT TTATTTACGC CGCCACACAG TATTTCAAAT GAAGCTTTGG TGGAGAGCTT CAACGCCTAT GTAGATATGT TTAACCTTGA AAATGCAGGA TTAATTGAGC AGGGCCATGT CGAGCCGCTG TCTTATTCCT CCAGTGAGTT TATCCAGAAG GCCTCGGGCA TCAAGCACAG ATATGTGATG GTTAAAGACG GTATTCTCGA TCCTGAAATC ATGATGCCGC TTATTCCTGA GCGCAGCAGT GACGAGTTAT CTATGCAGGC CGAAATTGGG GTTGAGGCGG CAGTGATGGC GCTTAAACAA GCGGATGTGA AGGCCGAGAA AATCGATTTA GTGATCGTTT CCTGTGCTTA TACACAGCGC GCGTATCCTG CGATGGCGAT TGAAATCCAG CGGGCACTGG GGACTCGTGG CTATGGTTAC GATATGCAGG TTGCCTGTTC TTCAGCCACC TTTGCCATTG TGGCCGCCGC CAATGCGATT GCAACGGGCT CGGCTTCACG GGTGTTAGTG ATTAACCCCG AAATTTGTTC GGCGCAGGTG AACTACCGTG ACCGTGACAG TCACTTTATC TTCGGGGATG TGGCGACCGC TATGGTGCTT GAAGAGCAAA GCCTAGTGGC CGCCAATAAA GGCTTCAACA TTGTTTCAAG TCGTTGTTTT ACAGACTACT CGAACAATAT TCGCAGTAAT TTCGGTTTTT TAAATCGCTG CGATCCAAGC TCGGCGCATC AGGCGGATAA GTTATTCCAC CAACAGGGTC GCAAAGTCTT TAAAGAACTG TTGCCGATGA TCTACCAACA TTTAGACGAG CATTTGGCCG AGCAATCCCT TACGCCACAG TCCTTTAAAC GTTTGTGGTT GCATCAAGCC AACATCAACA TGAACCAATT TGTGGTGAAA AAACTGCTAG GGGATGAGGT AACGCCTGAG CAAGCCCCCG TGGTGCTCGA CGAGTATGCC AATACCGCCT CCGCTGGCTC AGTGATTGCC TTCCATAAAT ATTCCGCTGA CTTTAATGCG GGCGATTTAG GGCTATTAAG CTCCTTTGGC GCGGGTTACT CCATCGGTAG CGTGATCCTG CAAAAACGCT AA
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Protein sequence | MKQVVISGSG LFTPPHSISN EALVESFNAY VDMFNLENAG LIEQGHVEPL SYSSSEFIQK ASGIKHRYVM VKDGILDPEI MMPLIPERSS DELSMQAEIG VEAAVMALKQ ADVKAEKIDL VIVSCAYTQR AYPAMAIEIQ RALGTRGYGY DMQVACSSAT FAIVAAANAI ATGSASRVLV INPEICSAQV NYRDRDSHFI FGDVATAMVL EEQSLVAANK GFNIVSSRCF TDYSNNIRSN FGFLNRCDPS SAHQADKLFH QQGRKVFKEL LPMIYQHLDE HLAEQSLTPQ SFKRLWLHQA NINMNQFVVK KLLGDEVTPE QAPVVLDEYA NTASAGSVIA FHKYSADFNA GDLGLLSSFG AGYSIGSVIL QKR
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