| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1501 |
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| Symbol | |
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| ID | 4252079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1762492 |
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| End bp | 1763826 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118100 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_733636 |
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| Protein GI | 113969843 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.561992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000145013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAAC AACAAACGGA CTTGGGCAAA GATCCAAGAA CTATGGTCAC CCCTAAGGCA
TTCACTATTG CCGAATCTGT GCTTTACACC CCGCTAGCGA CGCCATTAAG GCGGGCGCTG
GCGATGTTAA TCGACGGTTT ATTCATCACT ATTTTAGCCG AACAAATGGA TTGGCTGTTT
GTTCTGCTGG TGGTGGGGAT TATTTATATC GAGAAACGCA GTCGCCAGTT TGGTCGCTTA
CTCAAATGGG GCCTCTACGC CGCCATGCTG GGATTAATGC TCTTTAGCTC GGCGGGAAAT
TTGTGGAATT TCCATCAATC GAATCGATCC ACCCGCGAGA AGGTCTCCGC GCCCCAGGAT
ATTAACGCTG TTGTTAAGGC GATTCCTGGT CTTGTCTCCC TCGGACTCTG TGACAATACC
GATTGTGCCC GTGAACAGAT CCGTGCTTTG CAGCAGACAC TCGAAAATGG GCCCATGGAG
GGAATGTCGG CAGCTGAGCG CCGCGATATG GTATTAGATA CTTTAGCGAG CACGGAGTTA
TCCGAGGCCG ATAAAGCGCA GTTACGTGAT GAAATGATGG CGGGCAGACT CTGGCCCGAG
GTGAAGGTGT TTGAAGTCAC CCTAGACTCC ACTAAGGGCT CAGCTAAAAA CTCAACCAAG
GAGCCAAACA CATTATCACC GCCGCCACAG CCAAGTCCGT CGCTCGCAAA TCTGTCGTCC
GCTGGCAAGC TTGATGCCGT TCCCGTATCA GAACCGCGAA CCGATGGATT AGCCAACGCT
CAAACCGATA ATCGAGCGGC CATCGAAAAC GCTCCCTTAG TTCTTGACAC CAACCTCAAT
CCTTCGCATC AAACCGAAAG CCGCAACAGT GAAACCAATG ATGAGGAAGA GAGTGACACC
CGCAGTGTGC TGGCGTGGAT CAAAGGCTTT ATGAGCGATA TGGGTTTAGG TTTTGGCTGG
GCCGCATTTT ACTTCACTGT GTTTACCGCC AAATTTGATG GTCAGACCTT AGGTAAGAAA
CTCTTAGGCA TCCGCGTTAT CCAACTCGAT GGCGCTAAAA TCAGCCTTTG GGGGGCATTT
GGCCGTTATG GTGGTTATGC GGCGGGCTTC ACGACGGGCT TACTGGGCTT TATGCAGATA
TTTTGGGATG CCAATCGGCA GGGGATCCAA GATAAAATAT CTTCCACAGT CGTGATAGAC
TTAGCGCAAA TGCATAAAAA GCAACAATTA GAGCAGCAAC AGGCGCAGGC TGAACATGCA
TTGGCCGACG TGCCAACACA GAATAATGCG ACGTCTGCTC ACCTTACAAC AAGCACCCGT
TCGGAGCACC TATGA
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| Protein sequence | MKQQQTDLGK DPRTMVTPKA FTIAESVLYT PLATPLRRAL AMLIDGLFIT ILAEQMDWLF
VLLVVGIIYI EKRSRQFGRL LKWGLYAAML GLMLFSSAGN LWNFHQSNRS TREKVSAPQD
INAVVKAIPG LVSLGLCDNT DCAREQIRAL QQTLENGPME GMSAAERRDM VLDTLASTEL
SEADKAQLRD EMMAGRLWPE VKVFEVTLDS TKGSAKNSTK EPNTLSPPPQ PSPSLANLSS
AGKLDAVPVS EPRTDGLANA QTDNRAAIEN APLVLDTNLN PSHQTESRNS ETNDEEESDT
RSVLAWIKGF MSDMGLGFGW AAFYFTVFTA KFDGQTLGKK LLGIRVIQLD GAKISLWGAF
GRYGGYAAGF TTGLLGFMQI FWDANRQGIQ DKISSTVVID LAQMHKKQQL EQQQAQAEHA
LADVPTQNNA TSAHLTTSTR SEHL
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