| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1500 |
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| Symbol | |
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| ID | 4252078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1761278 |
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| End bp | 1762246 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118099 |
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| Product | cysteine synthase |
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| Protein accession | YP_733635 |
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| Protein GI | 113969842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00243522 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAA TTTTCGAAGA CAATTCATAT ACTATTGGCA ACACCCCGTT AGTGCGTTTA
AACCGCGTAA GCCAAGGTAA AGTGCTGGCA AAGGTCGAAG CACGTAATCC AAGTTTCAGT
GTCAAATGCC GTATCGGTGC CAATATGATT TGGGATGCCG AGAAAAAAGG CCTGCTCACC
AAAGATCACG AACTGATTGA GCCTACCTCA GGTAATACCG GGATTGCCTT AGCCTATGTG
GCGGCCGCCC GTGGTTATAA GCTGACGTTA ACTATGCCAA ATACTATGAG CTTAGAACGT
CGTAAACTGC TTAAAGCCTT AGGTGCAAAC CTAGTGCTGA CCGAAGGCGC AAAAGGCATG
AAAGGTGCTA TCGATAAAGC GGAAGAAATC CGTCAATCGG CGCCTGAAAA ATACATTATG
CTGCAGCAGT TTAATAACCC TGCTAACCCT GAAATCCACG AAAAAACCAC AGGTCCAGAG
ATTTGGAATG ATACCGATGG TGCTGTAGAT GTGTTTGTTG CGGGTGTAGG TACTGGCGGT
ACTATCACAG GTGTGAGCCG TTACCTGAAA AAAGTGGCTG GCAAAGCCAT TACTTCTGTT
GCGGTAGAAC CCGCAGATTC ACCGGTTATC ACCCAAACCC TAGCGGGATT ACCAGTGCAA
CCAGGTCCGC ACAAAATCCA AGGTATTGGC GCAGGTTTTA TCCCTGGTAA CTTAGATCTT
GAGTTAATCG ATCGCGTTGA AACCGTCACC AACGATGAAG CCATCGACAT GGCCCGCCGC
TTAATGCAAG AAGAAGGCAT TTTAGTCGGT ATTTCTTCTG GTGCTGCTGT GGTTGCCGCA
AACCGCATCG CTGCTCTACC TGAATTTGCG GATAAAAACA TTGTGGTTAT CCTGCCTTCA
GCTGCCGAAC GTTACTTATC TTCGGTACTG TTCCAAGGCC AGTTTGGCGA CGAAGAAAAC
ATTCAGTAA
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| Protein sequence | MSKIFEDNSY TIGNTPLVRL NRVSQGKVLA KVEARNPSFS VKCRIGANMI WDAEKKGLLT
KDHELIEPTS GNTGIALAYV AAARGYKLTL TMPNTMSLER RKLLKALGAN LVLTEGAKGM
KGAIDKAEEI RQSAPEKYIM LQQFNNPANP EIHEKTTGPE IWNDTDGAVD VFVAGVGTGG
TITGVSRYLK KVAGKAITSV AVEPADSPVI TQTLAGLPVQ PGPHKIQGIG AGFIPGNLDL
ELIDRVETVT NDEAIDMARR LMQEEGILVG ISSGAAVVAA NRIAALPEFA DKNIVVILPS
AAERYLSSVL FQGQFGDEEN IQ
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