Gene Shewmr4_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1499 
Symbol 
ID4252077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1759991 
End bp1761064 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content48% 
IMG OID638118098 
Productmethyltransferase type 12 
Protein accessionYP_733634 
Protein GI113969841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00534816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTTCT ATCACACCCC GAAAGCCTTA AGTGCCTTTG ATGCCAAATT TGAGGCGCAA 
AAAATCGCCT TTGGCCCCAT CAGTTTTCAG GTTGCACATT GCCTGCTGAA ATTTGAAGTA
TTAGCCACCA TTGACCAAGC AGGCGAACAA GGGGTAAGCA TTGCCCAACT CGCGCAAACC
AATGTGTTAA ACGAGTATGC CCTTGGCGTC TTACTCGATA TGGGATTGAG TATGGGACTG
GTATGGCTCA ATGGCGATGC CTATGTGCTC GATAAAACAG GCTATTTTTT ACTGCACGAT
GATATGGCAG CTATTAACCT CAATTTTGTG CAGGACGTGT GTTATCAGGG ACTGTTTCAA
CTGGATAAGG CACTAGTCGC GGGTAAACCC GCAGGCTTAG CGGTATTTGG CGATTGGCAG
ACGATTTACC CCGCCCTTAA GGATTTACCT GCTCAGGCAA AGGCCAGCTG GTTTGCCTTC
GATCACTATT ATTCTGACCA CGCTTTTCCG CAGATTTTAC CCTTAGTGTT TGCCCATTCT
CCCAAGCATT TAGTCGATAT TGGCGGAAAT ACGGGAAAAT GGGCGCTAAG CTGCTGCGAG
TTTGATCCAG AGGTTGAAGT CACTCTGATG GACTTCCCCG GTCAATTAGC CGTTGCTAAA
GACAATGCTG CCAAGCATGG CTTTGCCGAG CGGATCCATA CCTTTGCCAC CGATTTGCTC
GATGAATCAC GTCCCTTTGT CGAAGGCGCC GATACCTATT GGATGAGCCA GTTCCTCGAC
TGCTTCTCTT CGGAGCAAAT CCTCAGCATT TTACAACGCA CCGCTCAGGC GATGACGCCA
AACAGTCAGT TGTTCATTGT CGAAACCTTC TGGGACAGAC AACCCTCTGC CGCCTCAGCC
TATTGCGTCA ATGCGACAAG CTTGTATTTT ACTGCGATGG CCAATGGCAA TAGCCGTATG
TACCACTCTA AGGACTTGAT AACGTTACTA CATCAAGCGG GCTTATACGT CGATGAAGAC
ACTGACAACC TTGGTCTGGG GCATACTTTG CTGCGTTGTA AACTAAAACC TTAA
 
Protein sequence
MSFYHTPKAL SAFDAKFEAQ KIAFGPISFQ VAHCLLKFEV LATIDQAGEQ GVSIAQLAQT 
NVLNEYALGV LLDMGLSMGL VWLNGDAYVL DKTGYFLLHD DMAAINLNFV QDVCYQGLFQ
LDKALVAGKP AGLAVFGDWQ TIYPALKDLP AQAKASWFAF DHYYSDHAFP QILPLVFAHS
PKHLVDIGGN TGKWALSCCE FDPEVEVTLM DFPGQLAVAK DNAAKHGFAE RIHTFATDLL
DESRPFVEGA DTYWMSQFLD CFSSEQILSI LQRTAQAMTP NSQLFIVETF WDRQPSAASA
YCVNATSLYF TAMANGNSRM YHSKDLITLL HQAGLYVDED TDNLGLGHTL LRCKLKP