Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1493 |
Symbol | pflA |
ID | 4252071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1748492 |
End bp | 1749232 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118092 |
Product | pyruvate formate lyase-activating enzyme 1 |
Protein accession | YP_733628 |
Protein GI | 113969835 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0621061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.601453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTTA CCGGTCGGGT CCACTCAGTG GAATCCTTTG GCACAGTGGA TGGTCCAGGC ATACGGTTTA TCACCTTTAT GCAGGGCTGT TTAATGCGCT GTCAGTATTG TCATAACCGT GACACTTGGG ATCTTGATGG TGGTAAGGAA GTACAGGTCG ACGAGTTAAT GAGCCAAATC ATTAGCTACC GCCCCTTCCT CGATGCCAGC AACGGCGGAG TGACCGCCAG CGGTGGCGAA GCCATATTAC AGGCGGAGTT TGTCGCCGAG CTTTTTAAAG CCTGTAAGAA AGAAGGCATT CATACCTGTT TAGATACCAA CGGCTTTGTG CGTAAGTACA CGCCAGTGAT TGATGAGCTA CTCGATAATA CCGATCTGGT GTTGCTCGAT ATCAAACAGA TGAATGACGA TAAACACATT GAACTGACTA AGGTCAGTAA CCACAGAACG CTGCAATTTG CCGAGTATCT CGCCAAACGT AATCAGCCGA CGTGGATACG TTATGTGGTC GTGGGTGGAT TTACCGATGA TGAAGCCTCG GCATTACAGC TGGCCGAATT TATCAAGCCC ATGAAGAATA TTGAAAAAGT TGAACTCCTG CCCTACCACG AGCTTGGCAA ACATAAGTGG GAAGCTATGG GAGAAAGCTA TCAACTCGAT GGCGTTGCAC CACCGAGTCG CGACACCATG GAAAAAATTA AAGCCGTGTT TAGCTCACAG GGGATTAACG CTGTGTATTA A
|
Protein sequence | MAVTGRVHSV ESFGTVDGPG IRFITFMQGC LMRCQYCHNR DTWDLDGGKE VQVDELMSQI ISYRPFLDAS NGGVTASGGE AILQAEFVAE LFKACKKEGI HTCLDTNGFV RKYTPVIDEL LDNTDLVLLD IKQMNDDKHI ELTKVSNHRT LQFAEYLAKR NQPTWIRYVV VGGFTDDEAS ALQLAEFIKP MKNIEKVELL PYHELGKHKW EAMGESYQLD GVAPPSRDTM EKIKAVFSSQ GINAVY
|
| |