Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1489 |
Symbol | |
ID | 4252067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1743523 |
End bp | 1743957 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638118088 |
Product | hypothetical protein |
Protein accession | YP_733624 |
Protein GI | 113969831 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000234545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.878766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAACCT TATTTTTCCT TTCATTATTG TTTTTGTTTG GTTGTGGCGA TGCTGGAGAC AAAGAGCAGC ACGTGCTCAC TCCCGAAGAG GTGAGTCTCG GCTTTTTTAG CGCCATTTAT GTTGACCGAG ATGTGGAGAA AGCCAAGTTA TATGTCGATG CTCCACTCAA AGAAGTCTTA ACCCACTATT ACATCGCCGC AGCGGTACAG CGTAATATGC TCGGCCTGTC TATGACCAAT GTCGAAATGG AAATTGATGA TATCGATATC GACTTTTTCC GTAAGTTCAC CAAAGACGTC ATGGTCGTCG TTAAGATGAA GGGCTTAAAG GGTGGACAGC CTTGGATTGA TGACAGAACC ATTCGCCTGC ATAAAATTGG CGGCAAATGG ATTATCGTTG AGTTCATGCC AGAAAAACGT AAGGTGAATG GCTAA
|
Protein sequence | MRTLFFLSLL FLFGCGDAGD KEQHVLTPEE VSLGFFSAIY VDRDVEKAKL YVDAPLKEVL THYYIAAAVQ RNMLGLSMTN VEMEIDDIDI DFFRKFTKDV MVVVKMKGLK GGQPWIDDRT IRLHKIGGKW IIVEFMPEKR KVNG
|
| |