Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1485 |
Symbol | |
ID | 4252063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1740611 |
End bp | 1741717 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118084 |
Product | hypothetical protein |
Protein accession | YP_733620 |
Protein GI | 113969827 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00467252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTT CCAATACGCC GTCTGCCGCC TATAAAGGTT TTGCCGTCAT GGCCTTTGTG GTGATTATTT TGGCAGGGAT AAAGGCCGCC AGCCCGATTG TTGTTCCCTT TGTGTTATCC AGTTTTATTG CGGTGATCTG TAATCCGGCG ATAGGCTTGA TGACCAAATA TCGCGTACCT AAATGGCTCG CCGTGATCCT GCTGATGGGT TTTATCGTGT TGATGGGCTT GTGGCTCGCC TCTCTGGTAG GCAGCTCCAT TAATGAGTTT TCTAAGCAGT TGCCGCAGTA TCGCGATCAG CTGGTGGAGC AGTTTTCTTG GGTGCTGCAT AAGTTGCAGG CGCTGAATAT CCAAATCTCC AAGGAACAAG TGTTGGCCTA TTTCGATCCC GGCATGGCGT TGTCTATGAC CACCAATATG CTCTCGGGTG TTGGCAATGT GATGGCGAAT TTGTTCCTGA TCATTCTGAC CATCGTCTTT ATGCTGTTTG AGGCGCAATC TTTGCCGAAG AAACTGCACT TGGCACTGGA CGATCCGGAC ATGCGTTTGC AGCAGATTGA CCGTTTTCTG CAATCGGTGA ATCAATATAT GGTGATTAAG ACCTTAGTCA GTTTAGCGAC GGGCTTGATT GTCGGCGTGG GGCTTGCGGT GATTGGGGTG GATTACGCGC TGCTTTGGGC GGTTATCGCC TTTTTATTCA ACTATATCCC GAATATCGGC TCGATTATCG CGGCCATTCC CGCCGTGTTG CTGGCCTTTA TCCAATTAGG CCCTGCGGCG GCTGGCGGTA CGGCGATGTT ATACGTCGGC GCAAATATGG TGATGGGCAA TGTGGTTGAG CCTAAGTTTA TGGGCCGCGG TCTCGGGCTT TCCACCCTAG TGGTGTTCTT ATCGTTAATT TTTTGGGGGT GGTTACTGGG CTCGGTCGGC ATGTTGCTGT CGGTTCCCTT AACCATGGTC GTCAAGATCG CCCTCGAATC CAGTAAGAGT GGTGGCTGGT TAGCCATTTT ATTATCCGAC GATGTGGATG ATAAACTAGT AAGCCAATCG ACAAGCACCG CTCCGATTTC TGAACCTGTC GATACCCATT CAACAGATAA TAAGTAG
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Protein sequence | MTRSNTPSAA YKGFAVMAFV VIILAGIKAA SPIVVPFVLS SFIAVICNPA IGLMTKYRVP KWLAVILLMG FIVLMGLWLA SLVGSSINEF SKQLPQYRDQ LVEQFSWVLH KLQALNIQIS KEQVLAYFDP GMALSMTTNM LSGVGNVMAN LFLIILTIVF MLFEAQSLPK KLHLALDDPD MRLQQIDRFL QSVNQYMVIK TLVSLATGLI VGVGLAVIGV DYALLWAVIA FLFNYIPNIG SIIAAIPAVL LAFIQLGPAA AGGTAMLYVG ANMVMGNVVE PKFMGRGLGL STLVVFLSLI FWGWLLGSVG MLLSVPLTMV VKIALESSKS GGWLAILLSD DVDDKLVSQS TSTAPISEPV DTHSTDNK
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