Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1474 |
Symbol | |
ID | 4252052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1724622 |
End bp | 1727357 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118073 |
Product | hypothetical protein |
Protein accession | YP_733609 |
Protein GI | 113969816 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.115703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACA AGACGACACA TCCACTGGCG AAGAAGGGCG TTAAGGCGAC ACCACGCCAC CTTTGGCCGA GTAACTCCCA CAGGAATAAA GCTCAAAGTA AGGCGAATTG GCTGATGCCA ACTGGGGTCG CCCTACTGAT GGCGTTTAAT CTCACGGGTT GTTTTTCTGA CGATGAACCA GCACCAGAGG TCGTCACGCC ACCCGTGGTT CAGCCCCCTG AAACGGGCCC CACCTTCCCC GAAGGCGCCA TCAAAATCCT TCCGGGGGAT AATCTCACCA CCCGTATTCA AGAAGCCTTA ATCAACGCGC AAAGTGGCGC TGTGATTGTA CTACCAAAGG GCACCTTTAA TATCGATTCG ACATTACTGT TCGATGGCGA CGTGGATGGG GATGGCAGTT ATGCCAAAAA CGTCACTATC ATGGGCTACG GGATGAAGGA CACTATCCTC AATTTCGCCC AAGCTAACTC GGGGGATGGG ATTTTCGTGC AAAATGCGCT GAACATTACC ATTCAAGATC TGTCGGTCAA TGAGGCCAAA AACAACGGCA TCAAGCTTAA AAATACCAAT GGCATTATAC TGCGCCGCGT GGGGGCGGTG TGGGAAGGTG AGCTCGACAA AGATAACGGC GCCTATGGTC TGTATCCCGT TGAGTGTGAA AACATTTTGA TTGAAGACAG CTATGTCCGC GGCAGTGCCG ATGCGGGGAT TTATGTGGGC CAATCCCAAT ATATTGTGGT GCGCCGCAAT ATCGCCAAGG AAAACGTTGC GGGGATCGAA GTAGAAAACT CTAAGTATGC CGATGTGTAT GACAACGAAG CCATGGGCAA CACTGGCGGG ATTTTAGTGT TCGACTTGCC GATCAACAAC CACAGATACG GCTCTAGTGT GCGGATTTTC AACAACAAAG TGTATGACAA CAACACCCCT AACTTCGCCA ACGCCTCGGC CAACCCAGCT GGTGTGCATA TAGTGCCGCC GGGGACAGGG GTGATAGTGC TGTCGACCGC CGATGTGGAA ATCTTCAATA ACGAAATTAC CCATCACGAC ACCTTAGGGG TGACTGTCAG CAGCTTCTTT ATTGCAGAAC CCGATATGAC CTCCTTTGTC GGCAACTATG GTCAACCAGG TCAAGCCATT GAAGATGGCT GGCGCCCTGT GCCGCGCAAT ATCTACTTGC ACGACAACCT GATCACTGAC TATGGCAGCA AGCCTAAAGG TTATTTAATT CAAGATATTA TCCGTGCGTA TGTCATCAGT CACGGCACCT TGCCCGGCGT GCTCTACGAC GGCTTAGGGG AAATGCTTGC CAATAACGGC ACCGCCGCTT ACCTAGGTTT AAAAGAGGCA CCCTTTGCCG CAGATGGCAG CGATAACGTC TGCGCCAGTG ATAACGGTGA TGTGTCCTAC GGCAGACTCT ATGCCAACAG CAACACCGAC ATCAGCATCG CCGATGTGCA ATACGAGAAG ACCCAGAACA ACCTGCTGAA ATGTACCCAG GTGAGCCTAC CCGTGCACAC AGTCACCTTC GCGGGCCAAG TGTTTGGCTG CGGGGTTGAC GATAATACCG CGGGCTGTGA TGGCGGCGTG CTCGTTGGCG GCGGTGGCAC TATCGGTGAA GGCGAAGGTG GCTTGGTGGG TGATGGTGAC CAAAGTCTTT GTCAGGCGAC GGGTTCAAAC GTCAGTTGGG ATGCGCTGCT AAAAGCAAAC TGCCCTAAAC TGTCGGATTA CAATCTGTTC AGCGATGCCA AAAACCCTAC GGCAGGGCCT AATTCGGGCG GTGTCCCTTA CGATCTAAAC ACTCAGCTCT TTACCGACTA CGCCAGTAAA TACCGCTTTG TGTATTTGCC TTCGGGACAA AAAGCCAGTT ACTCCGAAAA CGAAGCGTTT GATTTCCCAG TGGGTAGCGT TATCGTCAAA ACCTTTGCCT TGCCAAGCGA TACCAGTAAG CGTGGGATCA GTAACGAGAG TTTGATTGAA ACCCGTTTGC TGATCCATCG TCCAACCGGT TGGAGCGCCC TGCCCTATGT ATGGAAGACC GACAAGACAG ATGCGACGCT GGCGAAAGCC GGTGCGATTA GCAGTCAAAC CTTAAGCCAT AAAGGAGAAA GCCTCACCTT TAATTACATG GTCCCGAGCA TGAACCAATG TAAACAGTGT CACCAGTTTA AGGCCGATGA CAACAGCAAC GCCGTGTTTG TGCCTATTGG TCCTAAGGCG CGCCATTTAA ACCGCAATTA CAGCTATCAA GATGGCACTA TGAACCAACT GTTGAAATGG GAAAGCCTAG GTATTTTGCA GGGATTACCG AACCTGAGCC AAGTACCACA AGTGCCCGCC TACCACGATG GTGACGAAGC CACAGTCGCA AGCTTAAGCG ATACCGCATT AATGCAGACG GCTAAGGGTT ATCTCGACAT CAACTGCGCC CATTGCCATA GACCCGAGGG TAACGCTTCT AACACTGGCC TTAAACTCGA ATACTGGCGT GGCTATAGCG ATGATGCAGG TTTCTCCCAC GGTACCTGTA AATCGCCGAT CGCCTATGGC GGTGGAAACT TAGGTTTCGA CGTCGTGCCT GGCAATGCCG CTGAGTCCAT CATGCACTTT AGAATGCAAA GTACGACCCC GGGCGATCGT ATGCCTGAAA TCGGTCGCAG CCTATCCCAT GATGAAGGCG TGGCGCTGAT CAGCGAATGG ATTAAACGCC TGCCTGCAGC AAGCTGCTCG CACTAG
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Protein sequence | MFNKTTHPLA KKGVKATPRH LWPSNSHRNK AQSKANWLMP TGVALLMAFN LTGCFSDDEP APEVVTPPVV QPPETGPTFP EGAIKILPGD NLTTRIQEAL INAQSGAVIV LPKGTFNIDS TLLFDGDVDG DGSYAKNVTI MGYGMKDTIL NFAQANSGDG IFVQNALNIT IQDLSVNEAK NNGIKLKNTN GIILRRVGAV WEGELDKDNG AYGLYPVECE NILIEDSYVR GSADAGIYVG QSQYIVVRRN IAKENVAGIE VENSKYADVY DNEAMGNTGG ILVFDLPINN HRYGSSVRIF NNKVYDNNTP NFANASANPA GVHIVPPGTG VIVLSTADVE IFNNEITHHD TLGVTVSSFF IAEPDMTSFV GNYGQPGQAI EDGWRPVPRN IYLHDNLITD YGSKPKGYLI QDIIRAYVIS HGTLPGVLYD GLGEMLANNG TAAYLGLKEA PFAADGSDNV CASDNGDVSY GRLYANSNTD ISIADVQYEK TQNNLLKCTQ VSLPVHTVTF AGQVFGCGVD DNTAGCDGGV LVGGGGTIGE GEGGLVGDGD QSLCQATGSN VSWDALLKAN CPKLSDYNLF SDAKNPTAGP NSGGVPYDLN TQLFTDYASK YRFVYLPSGQ KASYSENEAF DFPVGSVIVK TFALPSDTSK RGISNESLIE TRLLIHRPTG WSALPYVWKT DKTDATLAKA GAISSQTLSH KGESLTFNYM VPSMNQCKQC HQFKADDNSN AVFVPIGPKA RHLNRNYSYQ DGTMNQLLKW ESLGILQGLP NLSQVPQVPA YHDGDEATVA SLSDTALMQT AKGYLDINCA HCHRPEGNAS NTGLKLEYWR GYSDDAGFSH GTCKSPIAYG GGNLGFDVVP GNAAESIMHF RMQSTTPGDR MPEIGRSLSH DEGVALISEW IKRLPAASCS H
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