| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1471 |
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| Symbol | |
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| ID | 4252049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1721359 |
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| End bp | 1722378 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118070 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_733606 |
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| Protein GI | 113969813 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000173794 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAGC GCGTCGACTA CAAGACGAAC CTGATGGTGG GTGATCAAAC CTATCCCGCA
TTTGAGCTAC GTAATATTCT CGATTTTATT GCCTCGCAGT TAGGCGAAAA CGCCTTACAG
CAAGTCTGTG AGCATATCGG CGTTGGCCTA GCAGAACTCA ATCATTGCCA GTTTGTGTTT
GTGTGGCAGG TAGAATATGC GATGGAGTTT TTACGTTTGC AGGGCGGTGA CCCCGATATT
GGCACTAAAT TAGGCCTAAG CTATCGGGTG AGTAGTTTAG ATGTGCTCTT GCCCCATCTT
GCGCAGTTGA CTTCTCTACA GGCCTGCCTG CAGTTTGTGG TCAATCATCC CCAACTAGTT
GGCAGTTTTA CCGATACCTT AGTGCGCCTC GAAGAAGACT GTGTCTGCAT TCGTTGGCTC
AATACTGGCC GTATCGACAA AGCACAATAT GGATTTCAAT TTCTGCACAG CATAGGTTCG
CTGTTAGGGC TGGCGAGAGA GCTCACGGGG GAGGCGATAA CGCTTAGGCA AATCCATTTG
GCGGAACCTG TCCGCGATGA GCGTTTTTTA ACCCAGGCAA CGGGGGCTAG GGTGCAGTTT
AATTGCGAAT ATTATGAATG GAGCATTTCC CTCAACCAAC TCGCGCTTGC CATCCAGTAT
CCTTTCCCTG CCTACGCCGA AAAGACCGCT TCGGTATCAA CCACATCCTT TATCGAAACC
GTACTGGCGG CAATCAACGA GCATTTTCCC CAAGTGCTTC ATTTAGATGA CATGGCGACG
CAACTACATA TGAGCGATCG CAGCTTTCGG CGTAAGCTGG CACAGCTTGG CTCGAGTTAC
CAACGTTTAG TCGATCAGGT GCGTTGCCAA AGGGCGGTCG AGTTGATTTT AGCTAACGAG
TTGGATATTG AGGCGATTGC CGAGACCTTA GGCTACAGCG ATGTTAGCCA TTTCCGTCAA
TCTTTTAAGC ATTGGATTGG CCATCCGCCT GGGTATTTTA GCCGGCTAAA TGTTGGGTAA
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| Protein sequence | MLQRVDYKTN LMVGDQTYPA FELRNILDFI ASQLGENALQ QVCEHIGVGL AELNHCQFVF
VWQVEYAMEF LRLQGGDPDI GTKLGLSYRV SSLDVLLPHL AQLTSLQACL QFVVNHPQLV
GSFTDTLVRL EEDCVCIRWL NTGRIDKAQY GFQFLHSIGS LLGLARELTG EAITLRQIHL
AEPVRDERFL TQATGARVQF NCEYYEWSIS LNQLALAIQY PFPAYAEKTA SVSTTSFIET
VLAAINEHFP QVLHLDDMAT QLHMSDRSFR RKLAQLGSSY QRLVDQVRCQ RAVELILANE
LDIEAIAETL GYSDVSHFRQ SFKHWIGHPP GYFSRLNVG
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