Gene Shewmr4_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1453 
Symbol 
ID4252031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1701191 
End bp1701874 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content53% 
IMG OID638118052 
Productsiderophore biosynthesis protein, putative 
Protein accessionYP_733588 
Protein GI113969795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC AATGGAGTCG CCACTGTGCG GCCTCACTCT CAAAGCCCAT TGTGATTGAT 
GAGTTTGTGT TTAAACCACT CAATCTCCCG CAACACCTGT CTATGCTGCA GCGCTGGTTT
AACCAAGACT ATGCCCGCTT TTGGGGGATG CAGGGGATGA GTCTCGATGC ACTTGCTCGA
GCGATGGCGC CAAGCGAGCA CAAGCTCGCG CTGATCGGTG AATGGCAAGC CAAACCGCTG
TTTATGGTGG AGTTATACGA TCCCGCCCAC GATGAAGTGG GTGAACATTA CGCCGTGGAG
CGGCTCGATT GCGGCATGCA CCTCATCCTC GCGCCACTTG AGGGCAAACC CGTTCATGGC
TTGTCTGGCC AAGTGATGCA GGCTATTGCC GAGCTTATTC TCGACACGCT CGCCTTTAAA
CGAATGGTGG TCGAGCCAGA TCAGCAGAAT CACAAGATCC ACCGCTTAAA TAGCCAAATT
GGGATCCGCT ACCAAAAAGC CATTCAACTG CGCAGTAAAG CCGCATTCCT CGGCATTTGT
AGCGCAGAGA GTCGCCAATT AGCGCAAAAG ACCAGCACAC CTTTTATGCA GCGCACTGCA
TCCCTAGCAA CTCATGCAAC TCAAACAACT CATGCGACCC ACGCAACCGC TGTTAACCCT
ATCATTTTAC AGGTAAACCG ATGA
 
Protein sequence
MASQWSRHCA ASLSKPIVID EFVFKPLNLP QHLSMLQRWF NQDYARFWGM QGMSLDALAR 
AMAPSEHKLA LIGEWQAKPL FMVELYDPAH DEVGEHYAVE RLDCGMHLIL APLEGKPVHG
LSGQVMQAIA ELILDTLAFK RMVVEPDQQN HKIHRLNSQI GIRYQKAIQL RSKAAFLGIC
SAESRQLAQK TSTPFMQRTA SLATHATQTT HATHATAVNP IILQVNR