Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1453 |
Symbol | |
ID | 4252031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1701191 |
End bp | 1701874 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638118052 |
Product | siderophore biosynthesis protein, putative |
Protein accession | YP_733588 |
Protein GI | 113969795 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAGCC AATGGAGTCG CCACTGTGCG GCCTCACTCT CAAAGCCCAT TGTGATTGAT GAGTTTGTGT TTAAACCACT CAATCTCCCG CAACACCTGT CTATGCTGCA GCGCTGGTTT AACCAAGACT ATGCCCGCTT TTGGGGGATG CAGGGGATGA GTCTCGATGC ACTTGCTCGA GCGATGGCGC CAAGCGAGCA CAAGCTCGCG CTGATCGGTG AATGGCAAGC CAAACCGCTG TTTATGGTGG AGTTATACGA TCCCGCCCAC GATGAAGTGG GTGAACATTA CGCCGTGGAG CGGCTCGATT GCGGCATGCA CCTCATCCTC GCGCCACTTG AGGGCAAACC CGTTCATGGC TTGTCTGGCC AAGTGATGCA GGCTATTGCC GAGCTTATTC TCGACACGCT CGCCTTTAAA CGAATGGTGG TCGAGCCAGA TCAGCAGAAT CACAAGATCC ACCGCTTAAA TAGCCAAATT GGGATCCGCT ACCAAAAAGC CATTCAACTG CGCAGTAAAG CCGCATTCCT CGGCATTTGT AGCGCAGAGA GTCGCCAATT AGCGCAAAAG ACCAGCACAC CTTTTATGCA GCGCACTGCA TCCCTAGCAA CTCATGCAAC TCAAACAACT CATGCGACCC ACGCAACCGC TGTTAACCCT ATCATTTTAC AGGTAAACCG ATGA
|
Protein sequence | MASQWSRHCA ASLSKPIVID EFVFKPLNLP QHLSMLQRWF NQDYARFWGM QGMSLDALAR AMAPSEHKLA LIGEWQAKPL FMVELYDPAH DEVGEHYAVE RLDCGMHLIL APLEGKPVHG LSGQVMQAIA ELILDTLAFK RMVVEPDQQN HKIHRLNSQI GIRYQKAIQL RSKAAFLGIC SAESRQLAQK TSTPFMQRTA SLATHATQTT HATHATAVNP IILQVNR
|
| |