Gene Shewmr4_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1439 
Symbol 
ID4252017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1683808 
End bp1684305 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content52% 
IMG OID638118038 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_733574 
Protein GI113969781 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAC CATCCTCGGA GGCGGCAAAG GACCAGAGTC TTGCGATGCC TTCCCAAAAC 
CTGACCATTA ATGGCAGATC TTTTACCTTA AATGCGGATC CCAATATGCC TATCCTCTGG
GCGTTACGGG ATATTTTAGG CTTAACGGGC ACTAAATATG GCTGCGGCGC CGGACTCTGC
GGCGCCTGTA CCGTGCATTT AGATGGTCAG CCTGTGCGCG CCTGTTTAAC CAGCGTATCC
CAGGCGCAGG GCAAACAACT GACCACGATT GAAGGGCTGG ATAATCAAAA GCTTAAAAAT
GCTTGGGCCG AACAGAATGT TCCTCAGTGT GGTTATTGTC AGGCGGGGCA ATTAATGTCC
GCAGCAGCTT TAGTCACTCA GCATCCAAAA CCGTCGGCGG AGCAAATTGA TGCTGCCATG
TCGGGTAATT TGTGTCGCTG CGGTACCTAT CCTCGGATAA AAGCGGCGCT GCAAAGCTAT
GCCAAACAGG AGGGCTAA
 
Protein sequence
MAIPSSEAAK DQSLAMPSQN LTINGRSFTL NADPNMPILW ALRDILGLTG TKYGCGAGLC 
GACTVHLDGQ PVRACLTSVS QAQGKQLTTI EGLDNQKLKN AWAEQNVPQC GYCQAGQLMS
AAALVTQHPK PSAEQIDAAM SGNLCRCGTY PRIKAALQSY AKQEG