Gene Shewmr4_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1438 
Symbol 
ID4252016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1683118 
End bp1683804 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID638118037 
Producthypothetical protein 
Protein accessionYP_733573 
Protein GI113969780 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC GCCAACGCTT GTTAATTGCC GTGCTGGCTG CAGGGGAGAG CCGGCGATTT 
CAGGGGATTA AACTGGCGCA GCCATTATCA ACGCCCTCGA GTGTAAATAG CGGACAAAGC
ATCTTACAAC GCCATATCGA CCGTTTGGCT CGTTTCACCT CCGCACCATT GGCAATGGAG
TCATCCAATC AAGTCAGCGC TTCGTTGCTG GTGGTGCTCG GTGCCCACGC CCACGAACTT
CGTCCCCAAC TTGAGGCTTT TGGGGCGAAT CAATGCACGC TACTGCATAA TGCCGACTGG
CAGACGGGTT TGTCATCGTC GCTGCGAGCC GCGGCTATCT ATGCAAAAGC ACAGCAGTTT
GATGGCATGT TACTCACCTT AGCGGATCAG GTCGCGCTGA CATTTGAAGA CTATCAGCAG
TTGATTGAGA CTTGGCAAAC GAGTCAGCAA TCTGTGGCCG CGCTTTATCA TCACGAAGCA
GGGAAGCTGG ATGAATTAGG CGCTCCTGCT ATTTTTAATG CCTCAATACT CGATTTATTA
ACGGATTTGA CCGGCGATCG CGGCGCCAAA TCCATCTTAA AACAACTGGC AAATGTGGGT
GAGCTAGTGG CTGTTCCCTT ACCCCATGCC GCGATTGATA TTGATACTAA AGCCGATCTT
GCGTCGTGGT TGGCACTTAA GGAGTGA
 
Protein sequence
MPSRQRLLIA VLAAGESRRF QGIKLAQPLS TPSSVNSGQS ILQRHIDRLA RFTSAPLAME 
SSNQVSASLL VVLGAHAHEL RPQLEAFGAN QCTLLHNADW QTGLSSSLRA AAIYAKAQQF
DGMLLTLADQ VALTFEDYQQ LIETWQTSQQ SVAALYHHEA GKLDELGAPA IFNASILDLL
TDLTGDRGAK SILKQLANVG ELVAVPLPHA AIDIDTKADL ASWLALKE