Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1438 |
Symbol | |
ID | 4252016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1683118 |
End bp | 1683804 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638118037 |
Product | hypothetical protein |
Protein accession | YP_733573 |
Protein GI | 113969780 |
COG category | [R] General function prediction only |
COG ID | [COG2068] Uncharacterized MobA-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGTC GCCAACGCTT GTTAATTGCC GTGCTGGCTG CAGGGGAGAG CCGGCGATTT CAGGGGATTA AACTGGCGCA GCCATTATCA ACGCCCTCGA GTGTAAATAG CGGACAAAGC ATCTTACAAC GCCATATCGA CCGTTTGGCT CGTTTCACCT CCGCACCATT GGCAATGGAG TCATCCAATC AAGTCAGCGC TTCGTTGCTG GTGGTGCTCG GTGCCCACGC CCACGAACTT CGTCCCCAAC TTGAGGCTTT TGGGGCGAAT CAATGCACGC TACTGCATAA TGCCGACTGG CAGACGGGTT TGTCATCGTC GCTGCGAGCC GCGGCTATCT ATGCAAAAGC ACAGCAGTTT GATGGCATGT TACTCACCTT AGCGGATCAG GTCGCGCTGA CATTTGAAGA CTATCAGCAG TTGATTGAGA CTTGGCAAAC GAGTCAGCAA TCTGTGGCCG CGCTTTATCA TCACGAAGCA GGGAAGCTGG ATGAATTAGG CGCTCCTGCT ATTTTTAATG CCTCAATACT CGATTTATTA ACGGATTTGA CCGGCGATCG CGGCGCCAAA TCCATCTTAA AACAACTGGC AAATGTGGGT GAGCTAGTGG CTGTTCCCTT ACCCCATGCC GCGATTGATA TTGATACTAA AGCCGATCTT GCGTCGTGGT TGGCACTTAA GGAGTGA
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Protein sequence | MPSRQRLLIA VLAAGESRRF QGIKLAQPLS TPSSVNSGQS ILQRHIDRLA RFTSAPLAME SSNQVSASLL VVLGAHAHEL RPQLEAFGAN QCTLLHNADW QTGLSSSLRA AAIYAKAQQF DGMLLTLADQ VALTFEDYQQ LIETWQTSQQ SVAALYHHEA GKLDELGAPA IFNASILDLL TDLTGDRGAK SILKQLANVG ELVAVPLPHA AIDIDTKADL ASWLALKE
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