Gene Shewmr4_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1435 
Symbol 
ID4252013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1679156 
End bp1679800 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID638118034 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_733570 
Protein GI113969777 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATC AAATTATTCC TGTGACACCT TTCCAACAGA ATTGCAGCTT GATTTGGTGT 
GAAAAAACTA AGCGTGCCGC GGTTGTCGAT CCGGGAGGGA ATGTCGACCG TATTCTAGGT
GAAATGGACA AATTGGGACT GACCCTCGAA AAAGTGCTGC TGACCCACGG CCATATCGAC
CATGTGGGTG GCGCTAAACT CTTGGCGCAG CAAACGAATG TGCCGATCAT TGGCCCCCAT
GAGGCCGATA AATTTTGGAT TGATAATCTA CCTAAACAAA GCCAAAACTT TGGTTTTCCC
CACTGTGAGG CCTTTGAACC CGACCAATAT CTGCAGGATG GTGATGTCGT TACCGTAGGT
GAACAAAACT TAAGTGTGCT GCATTGCCCT GGGCATACAC CGGGTCACGT AGCATTTTAC
TCCGCTGAGG CCAAGCTTGC GTGGGTGGGC GATATCCTGT TTAGAAGCTC GATTGGCCGT
ACCGATTTTC CCCAATCAAA TCATCAAAGT TTGATCCATT CCATTACCAC CAAGCTCTGG
CCTTTAGGGG CCGACGTGGA ATTTATTCCC GGCCACGGAC CTATGTCGAC CTTTGGTGAA
GAGCGTGAAC ATAACCCTTT CGTGGCGGAT CAATTACTGC TTTAA
 
Protein sequence
MKYQIIPVTP FQQNCSLIWC EKTKRAAVVD PGGNVDRILG EMDKLGLTLE KVLLTHGHID 
HVGGAKLLAQ QTNVPIIGPH EADKFWIDNL PKQSQNFGFP HCEAFEPDQY LQDGDVVTVG
EQNLSVLHCP GHTPGHVAFY SAEAKLAWVG DILFRSSIGR TDFPQSNHQS LIHSITTKLW
PLGADVEFIP GHGPMSTFGE EREHNPFVAD QLLL