| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1433 |
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| Symbol | |
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| ID | 4252011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1675222 |
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| End bp | 1677342 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118032 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_733568 |
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| Protein GI | 113969775 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT ATATTGCTGA AAAACCAAGC CTAGGGCGTG CAATCGCCGA TGTGCTGCCT
AAACCCCACA AAAAAGGTGA CGGGTTTATC GAAGACGCAA ACGGTAACTG TGTGTCTTGG
TGTGTCGGGC ACTTGCTCGA ACAGGCTGAG CCCGATGCCT ATAATCCCGA GTTTAAATCG
TGGAAGTTTG AGCATTTACC CATAGTGCCA GAGAAGTGGC AGCTTAAACC TAAGGCCGCG
ACCCGCAGCC AACTCACAGT ACTTAAAAAG CTGGTGAAGC AGGCCGATAC TTTAGTGAAT
GCGGGTGATC CCGACAGGGA AGGGCAGTTA TTGGTTGATG AAGTGATCGC CTATTTGGGC
GTGACGGGCG ATAAATTACA GCAAACGCAG CGACTCCTTA TCAGCGACTT AAACCCGCAG
GCGGTGAAAC GTGCCTTGTC ACAACTCCGC AGTAATCGTG AGTTTATTCC TTTGTCGACC
TCGGCACTTG CCAGAAGCCG CGCCGATTGG CTCTATGGCA TGAATATGAC GCGGGCCTAC
ACTATTCAAG GGAAAAAGGT TGGCTATCAG GGCGTACTAT CGGTCGGCCG AGTACAGACC
CCGCTGCTTG GGCTTATCGT GCGCCGCGAT GAGGAAATCG CAAATTTTCA ATCTAAGCCT
TTTTATGAGG TTCTGGCCCA CTTAGTGACG GACAAAGATC AGGCTTTCAC GGCGAAGTGG
CAACCCAGTG AAGCCTGTTT ACCCTATATG GATGAGGAAG GGCGCGTGCT CGCTAAGGGC
CTAGCACAAA ATGTGGTGCG TCGGATCACC GATAAACCCG CCAAAGTGAC CCAGTTAAGC
ACTAAGGATA AGCAGCAGAA TCCGCCTTTA CCCTATAGTT TATCGGCGCT GCAAATAGAT
GCCGCCAAGC GCTTCGGTAT GAGCGCCAAG GACGTGCTCG ATACCTGCCA GAGCTTATAC
GAGCGCCATA AGCTAATCAC TTATCCACGC TCAGACAGTC GTTATTTGCC CACCGAGCAG
CATGGGCTTG CAAGTGGGGT ATTAGCGGCC ATTACGGGCG GTGCGCCCGA GTTAGTCGCA
CATGCTGAGG CGCCCAATCC TCGGCTTAAA TCTAAGGCGT GGGATGATAA AAAAGTCGAT
GCTCACCACG CCATTATTCC AACGGAAAAA CAGCCCAATC TAGCTGGTTT AAGCCAGCGG
GAAAGGCAGC TTTATCTGCA TATTGCTCGC CAGTATTTGG CGCAGTTTTA CCCTGCCTAT
TGCTACAGTG AAACCGCGGT CGAAGTGACG ATCGAAGGTG GCCTTTTTAA AACTAAGGCA
AAACAGGATA AGTCTCTCGG TTGGAAACAA CTGTTTGCCA GAGAAGAGAA CGAACGAAAG
GACGCATCAT CCGCAGCGAG TTTTGCGCAA GGCGACAAGG ACACAGAGGA AGGGGAATAT
CTTGGTCAGT TACCGCCTCT TACCTTAGGA CAAGTTCTTC ATTGTCACCA AGGTGAATTA
GTCGAGAAGC AAACTCAACC TCCCAAAGCC TTTACCGATG CTACCTTGCT GAGTGCGATG
ACGGGGATTA ACCGTTATGT GACTGACCCA GAGATCCGCA AAATTTTAAA GGAAACCGAT
GGCTTAGGTA CGGAAGCGAC TCGCGCAGGC ATTATTGAAC TGCTGTTTAA ACGGGGCTTT
ATTCAGCGTC AGGGCAAGTC GATTGTGGCC ACGGAGGTGG GCAAGGGCTT AATTAATAGT
TTACCCCTTA GCGCCACGAC ACCCGATATG ACGGCGCTGT GGGAGGCAAG TCTAAACGGT
ATCTGCCATA AAGAAATCTC ATATCAAGGC TTTATGCAAC CACTGCTGGG GACGCTAAAT
AACTTAATTG AAAATGCGGG CGCTCAATTA CCCTCAGCCC TCAATGGCTT AAAAGGGCAG
GGCTTTAAGC GTGCAGCAAC GAAAAAGTCC GGCTATCGAA AAGCTGGAGC CAAAGGGGCA
GGATGGAAAA AATCCGGCAC TAAAAACGCG GCAGTGGGAA GCTCGGCCGC TAAAACTACC
GCGGCTAAAT CGACGGTCTC GACATCCGGT ACGCCTACTA CGCCTAGACG GCGAGCGAGC
AAAGCGCCCG CCCAAGCTTG A
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| Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EDANGNCVSW CVGHLLEQAE PDAYNPEFKS
WKFEHLPIVP EKWQLKPKAA TRSQLTVLKK LVKQADTLVN AGDPDREGQL LVDEVIAYLG
VTGDKLQQTQ RLLISDLNPQ AVKRALSQLR SNREFIPLST SALARSRADW LYGMNMTRAY
TIQGKKVGYQ GVLSVGRVQT PLLGLIVRRD EEIANFQSKP FYEVLAHLVT DKDQAFTAKW
QPSEACLPYM DEEGRVLAKG LAQNVVRRIT DKPAKVTQLS TKDKQQNPPL PYSLSALQID
AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPTEQ HGLASGVLAA ITGGAPELVA
HAEAPNPRLK SKAWDDKKVD AHHAIIPTEK QPNLAGLSQR ERQLYLHIAR QYLAQFYPAY
CYSETAVEVT IEGGLFKTKA KQDKSLGWKQ LFAREENERK DASSAASFAQ GDKDTEEGEY
LGQLPPLTLG QVLHCHQGEL VEKQTQPPKA FTDATLLSAM TGINRYVTDP EIRKILKETD
GLGTEATRAG IIELLFKRGF IQRQGKSIVA TEVGKGLINS LPLSATTPDM TALWEASLNG
ICHKEISYQG FMQPLLGTLN NLIENAGAQL PSALNGLKGQ GFKRAATKKS GYRKAGAKGA
GWKKSGTKNA AVGSSAAKTT AAKSTVSTSG TPTTPRRRAS KAPAQA
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