| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1430 |
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| Symbol | |
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| ID | 4252008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1671257 |
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| End bp | 1672771 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118029 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_733565 |
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| Protein GI | 113969772 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGTA TCGTCGGAAT AGTTGGCCAA TCATCGGTTA ATCAGACCAT TTATGACGCA
CTGACCGTGC TTCAGCACAG AGGTCAGGAT GCGGCAGGTA TTGTGACCGT TGATCGTGGT
GCTTTCAGAC TACGTAAAGC CAATGGTCTG GTCAAAGATG TATTTGAAGT CAAACACATG
CAGCGCCTAC AGGGCAACGC TGGTATTGGC CACGTACGTT ATCCTACTGC AGGCAGTTCC
AGCGCGTCAG AAGCGCAGCC TTTCTATGTT AACTCGCCAT TTGGGATTTC ATTAGCCCAT
AACGGTAACT TAACCAACAC GGTTGAATTA GCTGAAGGCC TGATCAAAAA GCGTCGCCAT
GTGAACACCA CATCCGACTC AGAAGTATTA TTGAACCTGC TGGCCGATGA GCTGCAAAAA
ACCACCAGCT TGATGCTGAC CGCCGATGAG GTGTTCGACA CTGTTGCCAA GGTGCACGAG
CAAGCCCGTG GCGCCTACGC GGTAGTGGCC ATGATTATCG GTCAAGGTCT GGTGGCCTTT
CGCGATCCTT TCGGTATTCG TCCTCTGGTA TTAGGTAAGC ACGAAACCCC AACCGGTACT
GAGTACATGG TGGCCTCTGA GAGCGTGGCG CTCGATGCCG TCGGTTTTGA AGTGATGCGC
GATGTGGCAC CAGGCGAGGC AATTTATATC TCTCTCGATG GTCAGCTTTA CACTCGCCAA
TGCGCCAAAG AGCCAAGCTA CTCACCTTGT ATCTTCGAAT TCGTGTATTT TGCGCGTCCA
GATTCGACTA TCGACAACGT CTCTGTTTAT GCCAGCCGCG TAAACATGGG TGCCAAGCTC
GGTGAAAAGA TCAAAAAAGA ATGGTACGAC CATGATATCG ACGTGGTGAT CCCGATTCCT
GAAACTTCAT GCGATATCGC ATTAGAAATC GCCCGTTGCA TGGACTTACC TTACCGCCAA
GGTTTTGTGA AGAACCGTTA TATCGGCCGT ACCTTTATTA TGCCTGGTCA ACAGGAGCGT
AAAAAATCGG TACGCCGTAA ACTCAATGCC ATCAACACTG AGTTTAAAGG TAAGAACGTG
CTGTTAGTGG ATGACTCTAT CGTTCGTGGT ACCACCTCAG AACAAATCAT TGAGATGGCG
CGTGAAGCGG GTGCGAAGAA AGTGTACTTT GCCTCGGCGG CACCGGAAAT TCGTTTCCCG
AACGTTTACG GTATCGATAT GCCAACCTCG AATGAACTGA TTGCCCACGG TCGTGATGCC
GACGAAATTG CTAAGCTGAT TGGCGCCGAT GGCATTATCT TCCAAAATCT GCCGGATCTG
GTTGAAGCGG TGAGAATGGA AAACCCAGAG ATCAAACGTT TCGAAACCTC AGTGTTCGAC
GGTCACTACA TCACTAACGA TGTTGACCAA TCTTACCTCG ACCACTTAAC TCAGTTACGT
AACGACGATG CCAAAGCCGA CCGTAATAAA GACATTGGCA CTAACTTAGA GTTACACAAC
GTTTGCCATC CATAA
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| Protein sequence | MCGIVGIVGQ SSVNQTIYDA LTVLQHRGQD AAGIVTVDRG AFRLRKANGL VKDVFEVKHM
QRLQGNAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTVEL AEGLIKKRRH
VNTTSDSEVL LNLLADELQK TTSLMLTADE VFDTVAKVHE QARGAYAVVA MIIGQGLVAF
RDPFGIRPLV LGKHETPTGT EYMVASESVA LDAVGFEVMR DVAPGEAIYI SLDGQLYTRQ
CAKEPSYSPC IFEFVYFARP DSTIDNVSVY ASRVNMGAKL GEKIKKEWYD HDIDVVIPIP
ETSCDIALEI ARCMDLPYRQ GFVKNRYIGR TFIMPGQQER KKSVRRKLNA INTEFKGKNV
LLVDDSIVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTS NELIAHGRDA
DEIAKLIGAD GIIFQNLPDL VEAVRMENPE IKRFETSVFD GHYITNDVDQ SYLDHLTQLR
NDDAKADRNK DIGTNLELHN VCHP
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