Gene Shewmr4_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1428 
Symbol 
ID4252006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1669652 
End bp1670476 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content50% 
IMG OID638118027 
Productsporulation domain-containing protein 
Protein accessionYP_733563 
Protein GI113969770 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAGCC AGTTTCATAA TCGATTAGTC GGCACTGTGG TGCTGGTCGC CCTCGGGGTG 
ATTTTTCTGC CGGATATTTT AGATGGCAAG AAGGACCGCC AAGAGGAACA ATTTGCCGAA
ATTCCCCTGC GTCCTGCCGC GATAGCGCAG CAAAACGCCG ATGATATGTT TGAGGTGTTG
TCCACTCAGG ATGTGGATGG CGAAGGCGCC ATGCCTGAAG AGGCCTCTCC GAATGATGAG
GCGGCGTTAG CGCAGGCGGT CAATACTGAC GTCAAAGGCA CGCCTGCAGC AAAAGTTGAG
CCTAAAGCGG AAGCGGTGAA GGAGCAAGCC AAACCACAGA CGGCAAAAGC AGAAACTAAA
CCTGAAGTGA AAGAGCCGGT GAAAACCGAG ACTGCTAAGG CCGAGCCGAA GAAAGAGACG
CCAAAGCCGA CTCCAGTGAA AACTGAGCCG AAAAAGCCAG AATCCAAGCC AACCACAGTG
GCGAAAACTG ACAAGCCTAA AGCCGAAACT GCGAAAACAG AATCTGCAAA ACCTGCCAAA
GACGATGGCA TTAAAGTGGT GAGCCGTGAT TCATTAAAAC CTGGACTTAC CCTGCAACTA
GGCGCATTTA GCAATGCCGC CAACGTAAAA GCGCTGGTGG CGCAGTTACG CAAAAGTGGT
TACAAGGCGT ACACAATTCC AGACACACCA AAGGATGGCG TATTGACTAA AGTGTTCGTG
GGGCCTGATG TTTCCGAAGC TAAGCTCAAG AAAATGCAGG AAGAAATTGA AACCCTAACC
CGTTTGAAAG GCAGAATTGT GCCTTTTAAT CCGTTGGAAT CTTAA
 
Protein sequence
MSSQFHNRLV GTVVLVALGV IFLPDILDGK KDRQEEQFAE IPLRPAAIAQ QNADDMFEVL 
STQDVDGEGA MPEEASPNDE AALAQAVNTD VKGTPAAKVE PKAEAVKEQA KPQTAKAETK
PEVKEPVKTE TAKAEPKKET PKPTPVKTEP KKPESKPTTV AKTDKPKAET AKTESAKPAK
DDGIKVVSRD SLKPGLTLQL GAFSNAANVK ALVAQLRKSG YKAYTIPDTP KDGVLTKVFV
GPDVSEAKLK KMQEEIETLT RLKGRIVPFN PLES