Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1424 |
Symbol | |
ID | 4252002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1662835 |
End bp | 1663851 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118023 |
Product | aspartate semialdehyde dehydrogenase |
Protein accession | YP_733559 |
Protein GI | 113969766 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000300384 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGG AATTTAATGT TGTCGTTTTA GGTGCATCGG GCGCAGTGGG TCAAACTATG ATTGAGATCC TCGAAGAGCG TAACTTCCCG GTAGCGAACT TATACCCTTT AGCCAGTAGC CGTAGCGCCG GTGAAACGGT CAGCTTCCAT GGCAAACAAG TTACCATTTT GGACGTCGAA ACCTTCGATT GGAGTCAAGC ACAAATAGGC TTTTTCTCTG CCGGTGGCGA TGTGTCGGCC AAGTGGGCGC CTATTGCCGC TGAAGCGGGT TGTGTGGTGA TCGATAACAC TTCGCACTTC CGCTACGACA TTGATATTCC ATTGGTTGTG CCTGAGGTTA ACCCCCATGC TATTGCCGAT TTCCGCAACC GTAACATCAT CGCCAACCCG AACTGCTCGA CCATCCAAAT GCTGGTGGCA CTAAAACCGA TTTACGACAC TTACGGTATC AGCCGTATTA ACGTTGCGAC CTACCAGTCT GTCTCTGGTA CAGGTAAAAA GGCGATTGAA GAGCTGGCAA AACAATGCAC TAAGTTGCTG CAAGGTCTGC CTGCTGACGC TGAAGTTTAT CCAAAGCAAA TCGCGTTTAA CGTATTGCCG CAAATCGATA AATTTATGGA TAACGGCTAC ACCAAAGAAG AAATGAAAAT GGTCTGGGAA ACCCAGAAGA TTTTCGGTGA TGACGAAATC CTCGTCAACG CAACGGCCGT GCGTGTGCCT GTCTTCTATG GCCACTCAGA AGCCGTACAT ATCGAGACGC GTCAACCTGC TGATGCAGAA GATATTAAAG CTTTGCTGCG CGATGCCGAA GGAGTGGTAT TGTTCGAATC CGATGACGAA TATCCAACGG CAGTGACCCA TGCAGCGGGT ACCGATCCAG TCTATGTGGG CCGTGTGCGT AAGGATATCT CCCATTCTCA CGGTATTAAC CTTTGGGTGG TGTCGGACAA TATTCGTAAA GGCGCAGCCT TAAACAGTGT GCAAATTGCT GAGATTTTAG TGAGAGATTA TTACTAA
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Protein sequence | MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLYPLASS RSAGETVSFH GKQVTILDVE TFDWSQAQIG FFSAGGDVSA KWAPIAAEAG CVVIDNTSHF RYDIDIPLVV PEVNPHAIAD FRNRNIIANP NCSTIQMLVA LKPIYDTYGI SRINVATYQS VSGTGKKAIE ELAKQCTKLL QGLPADAEVY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDEI LVNATAVRVP VFYGHSEAVH IETRQPADAE DIKALLRDAE GVVLFESDDE YPTAVTHAAG TDPVYVGRVR KDISHSHGIN LWVVSDNIRK GAALNSVQIA EILVRDYY
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