Gene Shewmr4_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1418 
Symbol 
ID4251996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1655537 
End bp1656679 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content51% 
IMG OID638118017 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_733553 
Protein GI113969760 
COG category[S] Function unknown 
COG ID[COG3199] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0686596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGT TTCGTTTAGG CTTAGTCATC AATCCACTGG CGGGTTTAGG TGGTAGTGTG 
GGTCTTAAGG GTAGCGATGG TGTGGCAGAA GAAGCCCTTG CCTTAGGCGC CGAGCCCAAG
GCGATAAAGC GTATGATGCA AGCCTTAGAA GTGATTGCCC CTTTTGCCAA AGATATCGAA
ATCATTACCG CCTCAGGTGT GATGGGGGAG GATGCTGCCA ACGCCTTAGG TTTTAACACC
CGTGTGGTGT ATCAAACTCC GGATAAAACT CAAGCGATAG ACACGCAAGC CGTTGTGCGT
ACCTTGCTGA ACGAACCGTT AGATTTATTA CTGTTTGCGG GGGGCGATGG CACGGCGCGC
GATGTGTATA GCGTGTTTGA ACAAGCCGTT ATCGACGATA AATTACCCGT GCTTGGTGTG
CCGGCTGGGG TAAAAATCCA TTCGGGCGTT TACGGCATCA CACCCCATGC TGCGGGCATG
GTCGTGAAAA TGTTGCTCGA AGGTGAGTTA GTCAGCCTGA TGAGCGCCGA TGTGATGGAT
ATTGATGAAG TGGCCTTTCG CCAAGGCACG GTGCGCGCCA AACGGTTTGG TGAGCTGTTA
GTGCCAGCAG AACCCCGTTA TGTGCAAGCG GTGAAGATGG GCGGAAAAGA AGTCGATGAG
CTCGTACTCG CCGACATTGC CGCCGATGTT ATCCAGCAAA TGGAAGATGA GCTGTATATT
ATGGGCTCGG GCAGCACGGT CGCCTTTGTG ATGGAAGAAC TTGGGCTAGA TAACACCCTG
TTGGGGGTTG ATCTTATCCA AGATAAAGCC TTAGTGGCGA GTGATTTAAC CGCCAAGCAG
TTGCTTGACC TTACTCAAGA TAAGCCGGCA AAACTGGTAA TTACCTTGAT TGGCGGGCAG
GGGCATATTC TCGGTCGTGG CAACCAACAG TTGTCGCCAG AGCTTATCCG CCGCCTCGGT
AAGGACAATA TTATTATCCT CGCCACAAAA ACTAAGCTAA AAGCACTTGA AGGACGCCCC
TTAATTGTGG ATAGTGGCGA CCCTCAATTA GATCGTGAGC TTTGTGGCTA TTACAAAGTG
ACGACGGGTT ACCATGATTA TGTGATGTAT CAGGTGGCCA ACCCCGACTA TTCAGATTTA
TAG
 
Protein sequence
MIRFRLGLVI NPLAGLGGSV GLKGSDGVAE EALALGAEPK AIKRMMQALE VIAPFAKDIE 
IITASGVMGE DAANALGFNT RVVYQTPDKT QAIDTQAVVR TLLNEPLDLL LFAGGDGTAR
DVYSVFEQAV IDDKLPVLGV PAGVKIHSGV YGITPHAAGM VVKMLLEGEL VSLMSADVMD
IDEVAFRQGT VRAKRFGELL VPAEPRYVQA VKMGGKEVDE LVLADIAADV IQQMEDELYI
MGSGSTVAFV MEELGLDNTL LGVDLIQDKA LVASDLTAKQ LLDLTQDKPA KLVITLIGGQ
GHILGRGNQQ LSPELIRRLG KDNIIILATK TKLKALEGRP LIVDSGDPQL DRELCGYYKV
TTGYHDYVMY QVANPDYSDL