| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1416 |
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| Symbol | |
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| ID | 4251994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1653138 |
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| End bp | 1654232 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118015 |
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| Product | chorismate synthase |
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| Protein accession | YP_733551 |
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| Protein GI | 113969758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.25436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA ACAGTATTGG TCAAAATTTT GTGGTGACTA CCTTTGGTGA AAGTCACGGT
GTGGCGCTCG GTTGTATTAT TGATGGTTGC CCTCCAGGGC TCGAACTCAC CGAAGCCGAT
ATGCAGCATG ATTTAGACCG CCGTCGTCCT GGCACATCCC GTTATACCAC CGCGCGCCGT
GAGCCTGATG AAGTACGGAT CTTATCCGGT GTGTTTGAAG GCAAAACCAC AGGCACCTCC
ATTGGACTTC TGATCGAAAA CACCGATCAG CGCAGCCAAG ATTACTCCAA TATCAAAGAT
TTATTCCGTC CAGGACACGC CGATTACACC TATCAGCAAA AGTATGGTCT GCGTGATTAC
CGTGGCGGTG GCCGCTCATC GGCCCGCGAA ACCGCTATGC GGGTTGCGGC GGGTGCTGTG
GCGAAAAAGT ATTTAAAACA AGTGCATGGT ATTAATATCC AAGGCTATAT GTCTCAACTT
GGACCGATTA GTGCCGAGAC CCTCGATTTT AGTCAAATCG AGCAGAATGC CTTTTTCTTC
CCCGATGCGA GTAAGCTCGA GGCGCTAGAT GAATATATGC GCGAGCTGAA AAAATCCGGT
GATTCCATTG GTGCCAAAAT CTCTGTGGTA GCGACAGGTG TTCCCGTTGG ACTGGGCGAA
CCCGTGTTCG ATAGGCTCGA TGCCGACATC GCCCATGCCT TAATGGGCAT AAACGCAGTA
AAAGGCGTTG AAATTGGCGA TGGCTTTGGC GTTGTCACGC AAAAGGGCTC GGAAGGACGC
GATTTAATGT CGCCACTGGG TTTTGAATCA AATCATGCCG GTGGCATACT CGGCGGCATT
TCATCGGGTC AACCCATCGT CGCCCATATT GCATTAAAAC CAACCTCGAG TATCAGTGTG
CCGGGCCAAA GCATGACGGC CCAAGGGGAA ATGGCGGAAG TGGTGACTAA AGGTCGTCAC
GACCCCTGTG TCGGGATCCG CGCGGTACCG ATCGCCGAAG CTATGCTGGC GATTGTGTTG
ATGGATCATC TGTTAAGACA CAGAGCTCAA AATCAGGATG TTTGCAGTCA CACACCGATT
CTCGGCATGA GATAG
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| Protein sequence | MSGNSIGQNF VVTTFGESHG VALGCIIDGC PPGLELTEAD MQHDLDRRRP GTSRYTTARR
EPDEVRILSG VFEGKTTGTS IGLLIENTDQ RSQDYSNIKD LFRPGHADYT YQQKYGLRDY
RGGGRSSARE TAMRVAAGAV AKKYLKQVHG INIQGYMSQL GPISAETLDF SQIEQNAFFF
PDASKLEALD EYMRELKKSG DSIGAKISVV ATGVPVGLGE PVFDRLDADI AHALMGINAV
KGVEIGDGFG VVTQKGSEGR DLMSPLGFES NHAGGILGGI SSGQPIVAHI ALKPTSSISV
PGQSMTAQGE MAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NQDVCSHTPI
LGMR
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