Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1414 |
Symbol | |
ID | 4251992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1651454 |
End bp | 1651984 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118013 |
Product | hypothetical protein |
Protein accession | YP_733549 |
Protein GI | 113969756 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.616543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG ACGATGATAA AGAAGGCATG GCGATGTTTT CGGCGCTGAT CGAGGGGATA AAACCTATCG CCCAAGATAA GCGGCATTTT CGCACGCCCC TAAAAACCAA ACAGGAAATT GAACTGAAAG AGCAGCAACT GCATGCTAAC AGTTATTTCT CAGATACTTA TCAACCTCTG CTGCCCGTTC AGGGGCCAAT GCGTTGGCTC GATGAGGGTG TCGATAGTCT CGAGCTTAAA CGCTTAAGAC GTGGCGATTA CCAACCGGAT TTATTGCTGG ACTTACACGG TTACCGCCAA TCCGAGGCTA AACTCGAGCT CGCGGCGCTC ATTCAAGCCT GCGTAAAACA GCAAAGCCAA TGTTGTTGTG TGATGCACGG TTACGGCACT GGCATACTAA AACAGCAGGT GCCTATGTGG TTGGTGCAAC ATCCGATGGT AAAAGCGTTT CATCAGGCCC CTAAAGAATG GGGTGGCGAT GCGGCGCTGC TGGTGCTTAT CGATATTGGC GACCAGCCGC ATCGACGTTA A
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Protein sequence | MNKDDDKEGM AMFSALIEGI KPIAQDKRHF RTPLKTKQEI ELKEQQLHAN SYFSDTYQPL LPVQGPMRWL DEGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELAAL IQACVKQQSQ CCCVMHGYGT GILKQQVPMW LVQHPMVKAF HQAPKEWGGD AALLVLIDIG DQPHRR
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