Gene Shewmr4_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1414 
Symbol 
ID4251992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1651454 
End bp1651984 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content50% 
IMG OID638118013 
Producthypothetical protein 
Protein accessionYP_733549 
Protein GI113969756 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.616543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG ACGATGATAA AGAAGGCATG GCGATGTTTT CGGCGCTGAT CGAGGGGATA 
AAACCTATCG CCCAAGATAA GCGGCATTTT CGCACGCCCC TAAAAACCAA ACAGGAAATT
GAACTGAAAG AGCAGCAACT GCATGCTAAC AGTTATTTCT CAGATACTTA TCAACCTCTG
CTGCCCGTTC AGGGGCCAAT GCGTTGGCTC GATGAGGGTG TCGATAGTCT CGAGCTTAAA
CGCTTAAGAC GTGGCGATTA CCAACCGGAT TTATTGCTGG ACTTACACGG TTACCGCCAA
TCCGAGGCTA AACTCGAGCT CGCGGCGCTC ATTCAAGCCT GCGTAAAACA GCAAAGCCAA
TGTTGTTGTG TGATGCACGG TTACGGCACT GGCATACTAA AACAGCAGGT GCCTATGTGG
TTGGTGCAAC ATCCGATGGT AAAAGCGTTT CATCAGGCCC CTAAAGAATG GGGTGGCGAT
GCGGCGCTGC TGGTGCTTAT CGATATTGGC GACCAGCCGC ATCGACGTTA A
 
Protein sequence
MNKDDDKEGM AMFSALIEGI KPIAQDKRHF RTPLKTKQEI ELKEQQLHAN SYFSDTYQPL 
LPVQGPMRWL DEGVDSLELK RLRRGDYQPD LLLDLHGYRQ SEAKLELAAL IQACVKQQSQ
CCCVMHGYGT GILKQQVPMW LVQHPMVKAF HQAPKEWGGD AALLVLIDIG DQPHRR