| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1413 |
|---|
| Symbol | |
|---|
| ID | 4251991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1650917 |
|---|
| End bp | 1651387 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638118012 |
|---|
| Product | phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_733548 |
|---|
| Protein GI | 113969755 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.575562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAT TTTTGATGCG ACATGGTGAC GCTGGATTTA ATGCTCAGTC GGATAGGGAC
AGGACGCTTA CCGATTTAGG AAGACACCAT ACTGTCTTAA TGAGTAACTG GTTAGCCCGA
AGTGTCAGCG ATTTTGATCT TGTTTTGGTC AGCCCTTATT TACGTGCGCA GCAAACCTGG
CAAGAATTGA GTCAACATTT CCCCGAGCCT CGCAAATGGC TGGTCGTGGA TGATTTAGTG
CCGTCAGGCG ATCCTGCCAA TGTAGCCGCC TTAATTGTTG CCTATGCCGA ATTGTACAAG
GCCGATAAAG TGCTGGTGAT TTCCCATATG CCACTCTTGG GCTATTTGGT CAGCGAGCTA
GTCGCGGGTG TTGAGCCGCC CTTGTTTGCC ACCTCAGGAA TTACTCTGAT AGATAAACAT
GCCGAGCAGG CCAGCATTGT TTGGCAACAT GCGCCCCACA GCATTAGTTA A
|
|---|
| Protein sequence | MQLFLMRHGD AGFNAQSDRD RTLTDLGRHH TVLMSNWLAR SVSDFDLVLV SPYLRAQQTW
QELSQHFPEP RKWLVVDDLV PSGDPANVAA LIVAYAELYK ADKVLVISHM PLLGYLVSEL
VAGVEPPLFA TSGITLIDKH AEQASIVWQH APHSIS
|
|---|
| |